Rhodomicrobium lacus: QMO75_15215
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Entry
QMO75_15215 CDS
T09241
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rlac
Rhodomicrobium lacus
Pathway
rlac00521
Streptomycin biosynthesis
rlac00523
Polyketide sugar unit biosynthesis
rlac00541
Biosynthesis of various nucleotide sugars
rlac01100
Metabolic pathways
rlac01110
Biosynthesis of secondary metabolites
rlac01250
Biosynthesis of nucleotide sugars
Module
rlac_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rlac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
QMO75_15215 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
QMO75_15215 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
QMO75_15215 (rfbC)
Enzymes [BR:
rlac01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
QMO75_15215 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WKW50603
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All DBs
Position
3382295..3382849
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AA seq
184 aa
AA seq
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MRVWEENLPEVKVVEPAVFPDPRGYFFESFSADRYRDAGITRSFVQDNVSVSRKDVIRGL
HLQNPVQQGKLVTVLRGAINDVAVDVRIGSPSFGRHVSVRLDDRNHRQLWIPRGFAHGFV
ALTDETIVLYKCDAPYDRASEVGIRWNDPEINIDWGVVEPIVSEKDAAAPLLRDLIEKLP
RFEG
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgtttgggaggaaaatctgccggaagtcaaggtcgtagaacccgccgtgtttccg
gacccgcgcggctatttttttgagagtttcagtgccgaccgatatcgcgacgccgggatc
acccgaagcttcgtgcaggacaacgtgtctgtatcccgcaaggatgtcatccgggggctc
catttgcagaaccccgttcagcagggaaaacttgtgacggttctgcgcggtgccataaat
gacgtcgcggtcgacgtgcgcatcggcagcccttcattcgggcgccatgtgtcggtgcgt
ctcgatgatcgaaatcacaggcagctttggattccgcgtggctttgcccatggctttgtg
gcgctaacggacgaaaccatcgtgctttataagtgcgacgcgccttatgatcgagcgagc
gaagtcggcattcgctggaatgaccccgagataaacatcgattggggagtcgtggagccg
atcgtttcggagaaggacgcagcggcgccactgcttcgagacctgatcgagaagcttccg
cgatttgagggctga
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