Rhizobium leguminosarum bv. trifolii WSM1689: RLEG3_15820
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Entry
RLEG3_15820 CDS
T03009
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rlb
Rhizobium leguminosarum bv. trifolii WSM1689
Pathway
rlb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rlb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RLEG3_15820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlb03400
]
RLEG3_15820
Enzymes [BR:
rlb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RLEG3_15820
DNA repair and recombination proteins [BR:
rlb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RLEG3_15820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
HTH_15
Motif
Other DBs
NCBI-ProteinID:
AHF83198
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All DBs
Position
complement(1156425..1157327)
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AA seq
300 aa
AA seq
DB search
MISANDLSPAELAALLHFHADAGVEWLLEEEAIDRFAEFEAMKAARRPAAAQAQQQRPAA
GERPAPGQAQVRPNAAVRPAPAERAASGPQPAIPDGEAVQQARFVAETARSLVELRTAVE
AFSGCNLKHSARSTIFASGDAESGIMVIGSAPSAEDDREGMPFSGKSGQLFDKMLAAIGL
TRSAILLTQVIPWRPPGNRAPSAAEMDICRPFIERQIALAEPKAILLLGNFSARFFFGEN
DTIHGLRGRWKEIAVADCVIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSLSLLRN
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgatctccgccaacgacctttccccagccgagctcgcagcgcttctgcatttccatgcc
gatgccggcgtggaatggctgctggaggaagaggcgatcgaccgcttcgccgagttcgag
gcgatgaaggccgcccgccgcccggcggcggctcaggcgcagcagcaacgtcccgccgct
ggggaacgccctgccccaggtcaggcacaggtgcgcccgaatgcagcggtgcgcccggcg
cctgccgaacgcgcggcgtccggtccgcaaccggcaattccggatggcgaggcagtgcag
caggcgcgcttcgtcgccgagaccgcgcgctcgctcgtcgagctcaggaccgctgtcgaa
gccttcagcggctgcaacctcaagcacagtgcccgctcgaccatctttgccagcggcgat
gccgaaagcgggatcatggtgatcggctcggcgccgagcgccgaagatgatcgcgagggc
atgcccttctcgggaaaatccggccagctgttcgacaagatgctggcggcgatcgggctg
acgcgctcagcgattctgttgacgcaggtcatcccctggcggccacctggcaatcgcgcg
ccctcggcggcggaaatggacatctgccgacccttcatcgagcggcagatcgcgcttgcc
gaaccgaaggcgatcctgctgctcggcaatttttcggcgcgcttcttctttggcgaaaac
gacacgattcacgggttgcgcggccgttggaaggagattgccgttgcggactgtgtcatt
cctgccatagccagcctgcatccgcaggatctattaaccgcacctgtaaacaagcggctg
gcctggaatgacctactcgcctttcaagcgaagcttaagtccctctctttgcttagaaat
tag
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