Rhizobium leguminosarum bv. trifolii WSM1689: RLEG3_16260
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Entry
RLEG3_16260 CDS
T03009
Name
(GenBank) peptidoglycan-binding protein LysM
Organism
rlb
Rhizobium leguminosarum bv. trifolii WSM1689
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GFIT
Motif
Pfam:
Big_6
LysM
Big_13
Big_3_5
PycTM
TgpA_N
DUF6130
Motif
Other DBs
NCBI-ProteinID:
AHF83281
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Position
complement(1242657..1244675)
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AA seq
672 aa
AA seq
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MMKNRAGLLALAVLAIAILLMVFVVMPRIGGDATKVGDAINQASTEVKNTVNEAAKTSRS
AVGDAAAVADQVGRLSADAGVSLSELKALFADGKGPAIDVFTAGKTKAVNALTALADFTI
PEGLDPATQTLAAKAKVGGAKALAIVRSLPENIADALAAIAKAEVALTGAPETAPGANTA
GENTGPKLPAFDVLRVEPDGSTVIAGSAEPNGKLEVLDGEKVVTTANVDASGDFAAVLDD
PLAAGDHQLVLRFTGKDGKSTLSEEVATISVPKDGNGANLLAMVSKPGAASRIITAPKAG
TEVADASNPMALPAAPAATAAPTGELALQTPNLTDTPSGGADTAPAIPGTAAPDKTNVPD
VMVNAVEIEGNKIFIAGTTRSNAKVIGYADDSLVGQDTAGSDGHFVIDGVVALSVGDHKI
RVDVVDPTGKVIVRAAVNFNRPAGDQVRVAAQSVPAGANGASSMVLLDEGELGKLKAEVG
KAFGLLKGLFADGKLPGAEQLAAARSATEFALRSVADFRPAADAPDVFKQSSGSSSQIAG
NALKLLQGLPGDAKSVGAALVKLGGMIAELTAAPAPATPSANDVGSNQPKTIEQAPLTAN
NAAVIIRRGDTLWQISRRTYGLGVRYTTIYIANEDKIINPDRIRPGQIFGLPKDVLPNAE
ELHRKRMSGQHL
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaaccgtgccggcttgctggctcttgcagtcctcgcaatcgcaatcctactg
atggtgtttgtcgtcatgccgcgcatcggcggcgatgcaaccaaggtcggcgatgccatc
aaccaggcgagcacggaggtcaagaacacggttaacgaggcggcaaagacatcgcgctcc
gccgtgggcgacgcggctgcggtcgccgaccaggtcggtcgcctttcggccgatgccggc
gtatcgctcagcgagctcaaggcgctgtttgccgacggcaaaggtccggctatcgatgtc
ttcactgccggcaagaccaaggccgtgaacgcgctgaccgcgcttgccgatttcaccatt
cccgagggcctcgatcccgcgacccagacccttgccgccaaggccaaggtcggtggcgcg
aaggcactcgccatcgtccggtcgctgcccgagaacatcgccgatgcacttgccgcgatc
gccaaggccgaggttgcgctgaccggtgcgccggagaccgcccctggggcaaatacggca
ggggaaaatacaggcccgaagcttccggccttcgacgtattgcgcgtcgagcccgacgga
tcgacggtgattgccggttccgccgaaccgaacggcaagctcgaggtgctcgacggcgag
aaggtggtgacgacggccaatgtcgatgcgagcggcgattttgctgccgttctcgacgat
ccgcttgcagccggcgaccaccagcttgtgctcagattcacgggcaaggacggcaaaagc
acgctttccgaagaggtcgcgaccatttccgtgccgaaggatggtaatggcgccaacctt
ctcgccatggtctccaaacccggcgcggcgagccgcatcattaccgcgccgaaggccgga
accgaagtcgccgatgcttccaacccgatggcactgcctgctgcgcctgccgcaacagct
gcaccaaccggcgagttggccctgcagacaccgaacctcaccgacaccccttccggcggc
gctgatacggcacccgccattcccggcaccgccgcaccggataagacgaatgtgcccgat
gtgatggtcaatgccgtggaaatcgaaggcaacaagatcttcattgccggcacgacgcgc
tccaatgccaaggtcatcggttatgccgacgacagcctcgtcggccaggacacagccggc
tccgacggccatttcgtcatcgacggtgtggtggcgctctcggtcggcgaccataagatc
cgcgtcgatgtcgttgatcccacaggcaaggtaatcgtgcgcgcggcggtgaatttcaat
cgcccggccggcgatcaggtgagggtcgccgcgcaatcggtccccgccggcgccaacggc
gcttcctcgatggtgctgctcgacgaaggcgaactcggcaaactcaaagccgaagtcggc
aaggccttcggcctgctgaagggactgtttgccgatggcaagctgccaggcgccgagcag
cttgcggcggcgcgctcggcaacggaattcgcgctgcgctccgtcgccgatttccgcccg
gccgctgatgcgccagatgtcttcaagcaatcgtccggttcctcctcgcagatcgccggc
aatgcgctgaagctgctgcagggcctgcctggggatgcgaagtccgtcggcgccgcacta
gtcaagctgggcgggatgatcgccgaactcaccgccgcacccgcgccggcaacgccatct
gcaaacgatgtcggaagcaaccagccaaagacgatcgaacaggcgccgctgacggcaaac
aacgcggcagtcatcattcgccgcggtgatacgctgtggcagatctcgcgccgcacctat
ggcctcggcgttcgttacacgacgatctacatcgccaacgaggacaagatcatcaatccc
gatcgcatccgccctggccagatcttcggcctgccgaaggatgtgttgccgaatgccgaa
gagctgcaccgcaagcgcatgtccggccagcatctctaa
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