Rhizobium leguminosarum bv. trifolii WSM1689: RLEG3_16630
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Entry
RLEG3_16630 CDS
T03009
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rlb
Rhizobium leguminosarum bv. trifolii WSM1689
Brite
KEGG Orthology (KO) [BR:
rlb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rlb03016
]
RLEG3_16630
Enzymes [BR:
rlb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RLEG3_16630
Transfer RNA biogenesis [BR:
rlb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RLEG3_16630
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
wHTH-Calcineurin_assc
Motif
Other DBs
NCBI-ProteinID:
AHF83350
LinkDB
All DBs
Position
complement(1317992..1319137)
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AA seq
381 aa
AA seq
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MIETTADLAAACKELAKSDFITIDTEFLRETTFWPELCLIQMASPTTEVLVDPLAKGIDL
APFFELMADTKVLKVFHAARQDIEIIFNRGNLIPHPIFDTQVAAMVCGFGDSVSYDQLVS
RIKNVHIDKSSRFTDWSRRPLSDKQLDYALADVTHLRDVYLSLKAELEREGRTSWLSEEM
DILESRETYDMHPDDAWQRLKMRLRKPQELAILKYVAAWREREARARNVPRSRVLKDDAI
YEIAQQQPKDTEALGRLRTIPKGWERSTSGAAVIEAVNTALALPKADMPHVPRQAQAPEG
AAAAVELLKVLLKLISEKHGVAPKVIANSEDLDKIAAEGEKAEVAALHGWRRDLFGEPAL
QLIQGAIALRFVDRKVETVSL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaccaccgccgatttggcggccgcctgcaaagagctggccaagtccgacttc
atcaccatcgacaccgaattcctgcgcgaaacgactttctggccggagctctgcctgatc
caaatggcaagcccgacgacggaagttctcgtcgacccgctggccaagggcatcgatctc
gcccccttcttcgagctgatggccgatacgaaggtgctgaaggtctttcatgcagcccgc
caggacatcgaaatcatcttcaatcgcggcaatctcataccgcatccgatcttcgacacg
caggtcgccgccatggtctgcggcttcggcgacagcgtctcctatgaccagttggtcagc
cgcatcaagaacgtccatatcgacaagtcgtcgcgcttcaccgactggagccgccgaccg
ctctcggacaagcagctggattatgcgctggccgacgtcactcacctgcgcgacgtctac
ctgtcgctgaaggcggaactcgaacgcgaaggccgcacctcctggctctctgaggaaatg
gacatcctggagtcgcgcgaaacctacgacatgcatccagacgatgcctggcagcggctg
aagatgcgcctgcgcaagccgcaggagctggcgatcctgaaatatgtcgccgcctggcgt
gaacgcgaggcgcgggcccgcaacgtgccgcgttcgcgggtgctgaaggatgatgcgatc
tacgagatcgcccagcagcagcccaaggatacagaggcgctcggccgtctgcgcaccatt
ccgaagggttgggagcgctcaacttccggcgctgcggttatcgaggccgtcaacaccgct
cttgctcttccgaaggccgatatgccgcatgtgccacgccaggcgcaggcgcccgaaggg
gccgctgccgccgttgaattgttgaaggttctgctgaagctgatttcggaaaaacacggc
gtggcgccgaaggtgatcgccaatagcgaagatctcgacaagatcgccgccgagggcgag
aaggccgaagtcgctgccctgcacggctggcggcgcgatcttttcggcgagccggcactg
caactgatccagggcgcgatcgctctgcgtttcgtcgaccggaaggtcgaaaccgttagc
ctctga
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