Rhizobium leguminosarum bv. trifolii WSM1689: RLEG3_17305
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Entry
RLEG3_17305 CDS
T03009
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rlb
Rhizobium leguminosarum bv. trifolii WSM1689
Pathway
rlb03030
DNA replication
rlb03430
Mismatch repair
rlb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rlb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RLEG3_17305
03430 Mismatch repair
RLEG3_17305
03440 Homologous recombination
RLEG3_17305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rlb03032
]
RLEG3_17305
03400 DNA repair and recombination proteins [BR:
rlb03400
]
RLEG3_17305
Enzymes [BR:
rlb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RLEG3_17305
DNA replication proteins [BR:
rlb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RLEG3_17305
DNA repair and recombination proteins [BR:
rlb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RLEG3_17305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
AHF83474
LinkDB
All DBs
Position
1452118..1455615
Genome browser
AA seq
1165 aa
AA seq
DB search
MADTAKGSTGEATGGTPGFIHLRVHSAYSLLEGALPLKKILYKATGDSQPAIAITDTNNL
FVALEFSQKAMEDGLQPIIGCQVSIDMEDGLETEKRGGQQALVKLPSIVLLAATDAGYER
LVDLVSRAYLGGESNQAVHISASWLEEAGTEGLIALSGALTGPVDVAIKEGHPAQAEARL
LTLKHLFGDRLYVELQRHGTYDKRHEQKIIGLAYAHDLPLVATNEAFFPTRDDYDAHDAL
MAVAHNAIVSDDSRFRLTPDHYLKSRAEMVKLFADLPEALENTIEIATRCSFVLKTRKPI
LPRFTGATDDAEEAERAEASELRRQAVEGLDMRLATLGMSPGYEEKDYRERLDFELSVIE
RMRFPGYFLIVADFIKWAKQHDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLN
PERVSMPDFDIDFCQDRREEVIRYVQAKYGREQVAQIITFGSLQARAALRDVGRVLEMPY
GQVDKICKLVPNNPANPTPLSKAIEEEPKLQEEAAKEPVVARLLDIAQKIEGLYRHASTH
AAGIVIGDRPLSKLVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLKVAVDF
VSKLGIKVDLAAIPLDDKKTYEMLSRGETVGVFQVESAGMRKALIGMKPDCIEDIIALVA
LYRPGPMENIPTYNARKHGDEELESIHPMIDHLLKETQGVIVYQEQVMQIAQVLSGYSLG
EADLLRRAMGKKIKAEMDQQRERFVVGAVKNGVSKPQADNIFELLAKFANYGFNKSHAAA
YAIVSYQTAYMKAHYPVEFLAASMTLDMSNTEKVNDFRQDAKRLGIEVIAPSVQTSFRHF
ETGDNRIYYALAALKGVGESAVDHIVEVRGDKPFASIEDFCLRIDPRQVNRRVLESLIYA
GAFDCFDMDRAQLAAGLDRVLGYAQRAQENKLSGQSDIFGSTLTSGPEKISLPPFSPWLP
SERLLKEFQVLGFYLTAHPLDSYNNILQKMRVQTFAEFSAAIKQGAANARLAGTVISKQE
RKTRTGNKMGIIVFSDSSGQFEAVLFSEMLNQYRDVLESGKSFVLTATGEERPEGIGLRI
QTIQSLEEKSLQMQKALRVYVRDSGPLRMVAGHLNAKGDGLVSFIVIKEDGKREVEVALS
EKYRITPEIAAALRAAPGVIDVELV
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggcggatacggcaaagggttcaacgggtgaggcaaccggcggcacgccgggtttcatc
cacctgagggtccattccgcctattcgcttctcgagggcgccctgccgctgaagaagatc
ctctacaaagcgaccggcgacagccagccggcgattgcgattaccgacaccaacaatctg
ttcgtcgccctcgaattctcccagaaggcgatggaagacggcctgcagccgatcatcggc
tgccaggtctcgatcgacatggaagacgggttggaaacggaaaagcgcggcggccagcag
gccctggtcaagctgccgtcgatcgttcttctcgccgcgacggatgccggttacgaacgg
ctggtcgatctcgtcagccgggcctatctcggcggcgaaagcaaccaagccgttcatatc
agtgcctcctggctggaggaggcgggcacggaagggctgatcgcattgagcggtgccttg
accgggccggtcgacgtggcgattaaggaaggccatcccgctcaggcggaagcccggctg
ctcacgctgaagcacctcttcggcgacaggctttatgtcgagctgcagcgccacggcacc
tacgacaagcggcacgagcagaagattatcgggctcgcctatgcccacgacctgccgctg
gttgcgactaacgaggccttctttccgacccgcgacgattacgacgcccatgatgcgctg
atggcggtcgcgcacaacgccatcgtctccgacgacagccgctttcgcctgacgccggat
cactatctgaagagccgggccgagatggtcaagctcttcgccgacctgccggaagcgctg
gaaaatacgatcgagatcgccacgcgctgctccttcgtgctgaagacgagaaagccgatc
ctgccgcgcttcaccggggcgaccgacgatgccgaggaggccgaacgcgccgaggcgagc
gagctgcgccgccaggcggtcgaagggctggatatgcggcttgcaacgctcggcatgtcg
ccgggttacgaggaaaaggattatcgcgaacggctggatttcgagctcagcgtcatcgag
cgcatgcgttttcctggctacttcctgatcgttgcggacttcatcaaatgggccaagcag
catgacattccggtcggtcctggccgtggttcgggcgctggttcgctggtcgcctatgca
ttgacgatcaccgacgtcgatcccttgcgtttttcgctgctcttcgagcgcttcctcaat
ccggaacgcgtctcgatgccggacttcgacatcgacttctgccaggaccgccgtgaagag
gtgatccgctacgtccaggccaaatatggccgcgagcaggtggcgcagatcatcaccttc
ggttcgctgcaggcgcgcgctgcccttcgcgatgtcggccgcgtgcttgagatgccctat
ggccaggtcgacaagatctgcaaactcgtgccgaacaatcccgccaatccgacgccgctg
tctaaggcaatcgaggaggagccgaagctgcaggaggaggcggcaaaggaacctgttgta
gcgcgcctgctcgacatcgcccagaagatcgaggggctttaccgccatgcctcgacccat
gccgccggcatcgtcatcggcgaccggccgctttccaaactggtgccgatgtatcgcgat
ccgcgctcggacatgccggtcacccagttcaacatgaaatgggtggagcaggcgggcctc
gtcaagttcgacttcctcggcctgaagacgctgaccgtgctgaaggtcgcggtcgatttc
gtctccaagctcggcatcaaggtcgatctcgccgccattcctctcgacgacaagaagacc
tacgagatgctgtcgcgcggcgagacggtcggcgtgttccaggtggaaagtgccggcatg
cgcaaggcactgatcggcatgaagccggactgcatcgaggacatcatcgcgctggtggcg
ctctatcgtcccggcccgatggagaacatcccgacctacaatgcccgcaagcacggcgac
gaagagctggaatcgatccatccgatgatcgaccacctgctcaaggaaacccaaggcgtc
atcgtctatcaggaacaggtgatgcagatcgcccaggtactgtcaggctattcgctgggc
gaagccgaccttctgcgccgcgccatgggcaagaagatcaaggccgagatggaccagcag
cgcgaacgcttcgtcgtcggtgcggtcaagaacggcgtatcgaagccgcaggccgacaat
atcttcgaactgctggcgaagttcgccaattacggcttcaacaagtcgcatgccgccgcc
tatgccatcgtctcctaccagacggcctacatgaaggcgcattatccggtcgaattcctc
gccgcctcgatgacgctcgatatgtccaacacggaaaaggtcaatgatttccgccaggat
gccaagcgcctcggcatcgaggtgatcgcaccctcggtgcagacctccttccgccatttc
gagaccggcgacaaccgcatctattacgcgctcgccgccctcaagggcgtcggcgaatcc
gccgtcgaccatatcgtcgaggtgcgtggcgacaaacccttcgccagtatcgaggatttc
tgcctgcgcatcgatccgcgccaggtcaatcgtcgcgtgctcgaaagcctgatctatgcc
ggcgccttcgattgtttcgacatggatcgcgcccagctggcagccggcctcgaccgtgtt
ctcggttatgcccaacgcgcccaggagaacaagctgagcggccagtcggacattttcggc
agcacgctgacgtcggggcccgagaagatctccctgccgccgttctcgccctggctcccc
tccgagcggctgctcaaggaattccaggtgctgggcttttatctgacagcccacccgctc
gattcctacaacaacatcctgcagaagatgcgggtgcagacctttgccgagttttccgcc
gccatcaaacagggcgcggccaatgcgcgccttgccggtacggtcatctcgaagcaggag
cgcaagactcgcaccggcaacaagatgggcatcatcgtcttttcggattcttcgggccag
ttcgaagcggtgctgttttcggaaatgctgaaccagtatcgcgacgtgctcgaatcggga
aaatccttcgtgctgaccgcgacgggcgaggagcggccggagggcatcggcctgcgcatc
cagacgatccagtcgctggaggaaaagtcgctgcagatgcagaaggcgctgcgcgtctat
gtccgcgattccggaccgctgaggatggtcgccggccatctgaacgccaagggcgacggc
ctcgtctccttcatcgtcatcaaggaggatggtaaacgcgaggttgaggtggcgctgtcg
gagaaataccgcattacgccggagatcgccgccgcccttcgcgccgcccccggcgtcatc
gacgtcgaactggtctga
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