Rhizobium leguminosarum bv. trifolii WSM1689: RLEG3_17365
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Entry
RLEG3_17365 CDS
T03009
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rlb
Rhizobium leguminosarum bv. trifolii WSM1689
Brite
KEGG Orthology (KO) [BR:
rlb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rlb03032
]
RLEG3_17365
03400 DNA repair and recombination proteins [BR:
rlb03400
]
RLEG3_17365
Enzymes [BR:
rlb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RLEG3_17365
DNA replication proteins [BR:
rlb03032
]
Prokaryotic type
DNA Topoisomerases
RLEG3_17365
DNA repair and recombination proteins [BR:
rlb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RLEG3_17365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
AHF83486
LinkDB
All DBs
Position
complement(1467183..1469837)
Genome browser
AA seq
884 aa
AA seq
DB search
MNVVVVESPAKAKTINKYLGPGYKVLASFGHVRDLPAKDGSVLPDQDFEMLWEVDSASAK
RMKDIADALKSSDGLILATDPDREGEAISWHVLDMLNKKRALTGKSVKRVVFNAITKKAV
LDAMAAPRDLDVPLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR
ESEIERFISEEYWNISALLKTPRGDEFEARLVSANDKRLQPRAIGNGEDAGRLKALLEGA
SYVVDTVEAKPVKRNPGPPFTTSTLQQAASSNLGFSASRTMQVAQKLYEGVDIGGETVGL
ITYMRTDGVQMAPEAIDAARSAIVDQFGERYMPEKPRFYSTKAKNAQEAHEAIRPTDFYR
SPDRVRKFLDADQIRLYELIWKRGIASQMASAEIERTTAEITADNKGEKAGLRAVGSVIR
FDGFIAAYTDQKEDGEQSDDGDEDGRLPEINAREALAKQKINSTQHFTEPPPRYSEASLI
KKMEELGIGRPSTYAATLATLRDRDYVTIDKRKLIPQAKGRLVTAFLESFFTKYVEYDFT
ADLEEKLDRISAGELNWKQVLRDFWKDFFAQIEDTKELRVTNVLDSLNEALAPLVFPKRE
DGSDPRICQVCGTGNLSLKLGKYGAFVGCSNYPDCNYTRQLSSENGGEADGAALNEPKNL
GTDPTTGEELTLRSGRFGPYIQRGDGKEAKRASLPKGWKAEDIDYEKAMALISLPRDIGK
HPESGKMISSGIGRYGPFLLHDGSYANLETVEDVFSVGLNRAVTVIAEKANQAPGRGSRG
TPAALKTLGDHPDGGPITVRDGKYGPYVNWGKVNATLPRGKDPQAITVEEALALIAEKAG
RAPAGKAAKAKAKPKAAAAEAKSTKTAAKPKATKAKAPAKSKKG
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgtagtggtggaatcgcctgccaaggccaagacgatcaataagtatctaggt
ccgggatacaaagtgctcgcctccttcggtcatgtgcgcgatctgcctgccaaggatggc
tcagtcctccccgatcaggacttcgaaatgctttgggaggtcgacagcgcctccgccaag
cggatgaaggacattgccgacgcgttgaaatcctcggacggcctcattctcgcgaccgac
ccggatcgcgaaggagaggcgatttcctggcatgttctcgacatgctgaacaagaagcgc
gcgctcaccggcaagtcggtcaagcgcgtcgtcttcaacgcgatcaccaagaaggcagtg
ctcgacgcgatggctgcgccacgcgatctcgatgtgcctctggtcgacgcctatctcgcc
cggcgcgcactcgactacctcgtcggcttcaacctttcaccggttctctggcgcaagctg
cccggcgcgcgttcggccggccgcgttcagtcggtggcgcttcgcctcgtctgcgaccgt
gaatccgagatcgagcgcttcatttcggaagagtattggaacatctcggcgcttctgaag
acgccgcgcggcgacgagttcgaggcaaggctggtttcggcgaacgacaaacggctgcag
ccgcgcgcaatcggcaacggcgaggatgccggccggctgaaggcgttgctcgaaggtgcg
agctatgtcgtcgacacggtcgaggcgaaaccggtcaagcgcaacccgggaccgccgttt
acgacctcgacgctgcaacaggccgcctcctccaacctcggcttctcggcctcgcgcacc
atgcaggttgcccagaagctctatgagggcgtcgatatcggcggcgagacggtcggtctc
atcacctatatgcgaaccgacggcgtgcagatggcgcccgaggcgatcgacgcggcgcgt
agcgccatcgtcgaccagttcggcgaacgctatatgccggaaaagccacgcttctactcg
accaaggcgaagaacgcccaggaggcgcacgaggcgattcgtccgaccgatttctatcgt
tcgcccgaccgtgtacgcaaattcctcgatgccgaccagatccggctctacgagctgatc
tggaagcgcggcatcgccagccagatggcgtcggccgagatcgagcgcacgacggctgaa
atcaccgccgacaacaagggcgagaaagccggtctgcgcgccgtcggttcggtcatccgc
ttcgatggtttcatcgccgcctataccgaccagaaggaagatggcgagcagagcgacgac
ggcgacgaggatggccgcctgccggagatcaatgcgcgcgaggcgctcgccaagcagaag
atcaattcgacgcagcatttcaccgaaccgccgccgcgttattcggaagcctcgctgatc
aagaagatggaagagctcggcatcggccgcccctccacctatgccgcgacgctcgcgacg
ctgcgcgaccgcgattatgtgacgatcgacaagcgcaagctgatcccgcaggccaagggc
cggctggtgaccgctttcctcgaaagcttcttcaccaaatatgtcgaatacgacttcacc
gccgatctcgaagagaagcttgacaggatttccgccggcgagttgaactggaagcaggtg
ctgcgcgatttctggaaggatttcttcgcccagatcgaggacaccaaggaactgcgcgtc
accaacgtgctggattcgctgaacgaggcgctggcgccgctcgtcttcccgaagcgggag
gatggcagcgatcccaggatctgccaggtctgcggcaccggcaatctgtcgctgaagctc
ggcaaatacggcgccttcgtcggctgctcgaattatccggactgcaactacacccgccag
ctctcctccgaaaacggtggagaagcagacggtgctgcgctcaacgagccgaaaaacctc
ggcaccgatccgacgaccggcgaggaactgacgctgcggtccggccgcttcggtccctat
atccagcgcggcgacggcaaggaagccaaacgcgcctcgctgccgaagggctggaaggcc
gaggacatcgattatgaaaaggcgatggcactgatctcgctgccgcgcgatatcggcaaa
catcccgaatcgggcaagatgatctcgtccggcatcggccgctatgggccgttcctcctg
cacgacggctcctatgccaatctggaaaccgtcgaggacgtgttttcggttggcctcaac
cgtgccgtgacggttatcgccgaaaaggcgaaccaggccccgggccgaggttcgcgcggc
acgccggcagcgctgaagacgctcggcgatcatcctgatggcggccccatcaccgttcgc
gacggcaagtacggaccttacgtcaactggggcaaggtcaatgccacgctgccgaggggc
aaggatccgcaggccatcaccgtcgaggaggcgcttgcgctgatcgccgaaaaggcaggc
agggcgcctgcaggcaaggcggccaaggcgaaagccaagccgaaggcggcagccgccgaa
gccaagagcaccaagacggcggccaaaccgaaggcaacgaaggcgaaagcgcccgcgaaa
tcgaaaaagggctga
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