Rhizobium leguminosarum bv. trifolii WSM1689: RLEG3_17525
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Entry
RLEG3_17525 CDS
T03009
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
rlb
Rhizobium leguminosarum bv. trifolii WSM1689
Pathway
rlb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rlb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RLEG3_17525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rlb03021
]
RLEG3_17525
03400 DNA repair and recombination proteins [BR:
rlb03400
]
RLEG3_17525
Enzymes [BR:
rlb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RLEG3_17525
Transcription machinery [BR:
rlb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RLEG3_17525
DNA repair and recombination proteins [BR:
rlb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RLEG3_17525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
RPOC_hybrid
Apocytochr_F_C
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AHF83514
LinkDB
All DBs
Position
1502243..1506451
Genome browser
AA seq
1402 aa
AA seq
DB search
MNQEVMNLFNPQVPAQNFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRISTLLDMTLKDVERVLYFENYIVTEPGLTALKEHQLLSEEEYMLAVDEYGEDQFTA
MIGAEAIYEMLASMNLEKIAGDLRAELADTTSDLKQKKLMKRLKIVENFMESGNRPEWMI
MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKEKPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPILVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSILNQNEPGEGMAFSDLGELHHALE
SKVVTLHTKIRGRFKSVDEDGKPYSKIYETTPGRLLIGELLPKNGKVPFDICNQEMTKKN
ISKMIDTVYRHCGQKDTVIFCDRIMQLGFSHACRAGISFGKDDMVIPDAKAKIVADTENL
VKEYEQQYNDGLITQGEKYNKVVDAWGKATEKVAEEMMARIKAVEFDEKTGRQKPMNSIY
MMSHSGARGSPNQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDCIVTHVDCGTQTGLTMTAIVDAGQVVASIGARILGRT
ALDDIDHPVTGERIVDAGKMILEPDVVEIEKAGIQSIRIRSALTCEIQTGVCSVCYGRDL
ARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHLGGTATVVDQSFLEASYEGTVQIKNRN
ILRNSDGNLVAMGRNMTVQILDERGVERSSQRVAYGSKLHVDEGDKVKRGQRLAEWDPYT
RPMMTEVAGTVQFEDLVDGLSVLEATDESTGITKRQVIDWRSTPRGSDLKPAIVIKDVSG
NIAKLSRGGDARFFLSVDAILSVEPGTKVSQGDVLARSPLESAKTKDITGGLPRVAELFE
ARRPKDHAIIAEIDGTIRLGRDYKNKRRVIIEPAEDGVEPVEYLIPKGKPFHLQEGDYIE
KGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVVINDKHIEVIVRQMLQKVE
ITDAGDSTYIVGDNVDRIELEDVNDHLIEQGKKPAYGDPVLLGITKASLQTPSFISAASF
QETTKVLTEAAIAGKTDGLQGLKENVIVGRLIPAGTGGTMTQIRRIATSRDEMILEERRK
GTGAAVATPMLQDMAEKAPAAE
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaatcttttcaatccgcaggtgcctgcacagaatttcgattct
attcggatttcgatcgcgtctccggagaagatcctctcctggtcttacggtgagatcaag
aagccggaaaccatcaactaccgtacgttcaagccggaacgcgacggtctgttctgcgcg
cgcatcttcgggccgatcaaggactacgaatgcctgtgcggcaagtacaagcgtatgaag
tacaagggcatcatctgcgaaaagtgcggcgtcgaagtcacgctgtcgcgcgttcgccgt
gagcgcatgggccatatcgagctcgcagctcccgttgcccacatctggttcctgaagtcg
ctgccatcacgcatttcgacgctgctcgacatgacgctgaaggatgtcgagcgcgttctc
tacttcgaaaactacatcgtcaccgagccgggcctgaccgccctgaaggagcaccagctc
ctttcggaagaagagtacatgctcgccgtcgacgagtacggcgaagaccagttcaccgcg
atgatcggcgccgaggcgatctacgagatgctggcctcgatgaacctcgaaaagatcgcc
ggcgatctgcgtgccgagcttgccgacaccacgtcggatctcaagcagaagaagctgatg
aaacgcctgaagatcgtcgagaacttcatggagtcgggcaaccgtccggaatggatgatc
atgaaggtcgttccggtcatcccgccggatctgcgtccgctggttccgctcgacggcggc
cgtttcgcgacgtcggatctgaacgatctctaccgccgcgtcatcaaccgtaacaaccgt
ctgaagcgcctgatcgagcttcgtgcgcctggcatcatcatccgcaacgaaaagcgaatg
ctgcaggaatccgttgacgcgctgttcgataacggccgtcgcggccgcgtcatcaccggc
gccaacaagcgtccgctgaagtcgctctccgacatgctgaagggcaagcagggccgcttc
cgccagaacctgctcggcaagcgcgtcgactattccggccgttcggtcatcgtcaccggt
ccggaactgaagctgcaccagtgcggcctaccgaagaagatggcgctcgagctcttcaag
ccgttcatctatgcccgcctcgacgccaagggttactcctcgaccgtcaagcaggccaag
aagctggtcgaaaaggaaaagccggaggtctgggatatcctcgacgaggttatccgcgag
catccggttctcttgaaccgcgcgccgacgctgcaccgcctgggcatccaggccttcgaa
cctatcctggtcgaaggcaaggcgatccagctgcatccgctcgtctgcacggccttcaat
gccgacttcgacggcgaccagatggccgttcacgtgccgctgtcgctcgaggctcagctc
gaagcccgcgtgctgatgatgtcgaccaacaacatcctgcacccggccaacggcgcgccg
atcatcgttccctcgcaggacatggttctcggcctctactatctgtcgatcctcaatcag
aacgagccgggcgaaggcatggccttctccgatctcggcgagctgcatcatgccctcgaa
agcaaggtcgtgacgttgcacaccaagatccgcggccgtttcaagtcggtcgacgaggat
ggcaagccttactcgaagatctatgagacgacgcctggccgtctgctcatcggcgaactg
ctgccgaagaacggcaaggtgcccttcgatatctgcaaccaggaaatgaccaagaagaac
atctcgaagatgatcgacacggtctatcgccattgcggccagaaggacacggtcattttc
tgcgaccgcatcatgcagctcggcttttcccatgcctgccgcgccggcatctcgttcggc
aaggacgacatggtcattccggatgccaaggccaagatcgttgccgacaccgaaaacctg
gtgaaggaatacgagcagcagtacaatgacggcctgatcacccagggcgagaagtacaac
aaggttgtcgacgcctggggcaaggcgaccgaaaaggtcgccgaggagatgatggcccgc
atcaaggcggtcgaattcgacgagaagaccggtcgccagaagccgatgaactcgatctac
atgatgagccactccggtgcccgcggttctccgaaccagatgcgccagctgggcggcatg
cgtggcctcatggccaagccgtcgggcgaaatcatcgagaccccgatcatctcgaacttc
aaggaaggcctgaccgtcaacgagtacttcaactcgacgcacggcgcccgtaagggtctg
gcagacaccgccttgaagaccgccaactccggctacctgacccgccgtctcgtcgacgtc
gcgcaggattgcatcgtcacgcatgtcgattgcggaacgcagacgggcctcaccatgacc
gccatcgtcgatgccggccaggtggttgcctcgatcggcgcccgtatcctcggccgcacg
gcgctcgatgacatcgatcatccggtcacgggtgagcgcatcgtcgatgccggcaagatg
atcctcgagcccgacgtcgtcgaaatcgagaaggccggcatccagtcgatccgcatccgc
tcggcactgacctgcgaaatccagacgggcgtctgctcggtctgctacggccgcgacctc
gcgcgcggtacgccggtcaatatgggcgaagccgtcggcgtcatcgctgctcagtcgatc
ggcgagccgggcacccagctcaccatgcgtaccttccaccttggcggtacggcaaccgtg
gtcgaccagtcgttcctcgaagcctcgtacgaaggtacggtgcagatcaagaaccgcaac
atcctgcgcaactccgatggcaacctcgttgccatgggccgcaacatgaccgtccagatc
ctggacgaacgtggtgtcgagcggtcgtcgcagcgcgtggcctacggttcgaagctgcat
gtcgacgaaggcgacaaggtcaagcgcggccagcgcttggcggagtgggacccctacacc
cgtccgatgatgacggaagtggccggtaccgttcagtttgaagatctggtcgacggtctc
tccgttctggaagcgaccgacgaatcgaccggcatcaccaagcgtcaggttatcgactgg
cgttcgaccccgcgcggctcggacctcaagccggcgatcgtcatcaaggatgtcagcggc
aatatcgctaagctgtcccgtggtggtgacgcccgcttcttcctctcggtcgatgcgatc
ctgtcggtcgagccgggcacgaaggtctcccagggtgacgttctcgcccgttcgccgctc
gaaagcgccaagaccaaggacatcaccggcggtctgccgcgtgttgccgagctgttcgaa
gcccgccgtccgaaggaccacgccatcatcgcagagatcgatggtacgatccgcctcggc
cgcgactacaagaacaagcgtcgcgtcatcatcgagccggcggaagacggtgtcgagcct
gtcgaatacctgatcccgaagggcaagcccttccaccttcaggaaggcgactatatcgaa
aagggtgactacatcctcgacggtaacccggctccgcacgatatcctggcgatcaagggc
gtggaggctctggcctcctacctcgtcaacgagatccaggaagtttaccgcctgcagggc
gtcgtcatcaacgacaagcacatcgaggtgattgtccgtcagatgctgcagaaggtggaa
atcaccgatgcgggcgactcgacctatatcgtcggcgacaatgtcgaccggatcgagctc
gaagacgtcaacgatcacctgatcgagcagggcaagaagccagcctatggcgacccggtt
cttctcggcatcaccaaggcgtcgctgcagaccccgtccttcatctcggccgcgtccttc
caggaaacgaccaaggtgctgacggaagctgccatcgctggcaagaccgatggcctgcag
ggtctgaaggaaaacgtcatcgtcggccgcctcatcccggccggtaccggcggcaccatg
acccagatccgccgcatcgccacgtcgcgcgacgagatgatcctcgaagagcgccgcaag
ggcacgggtgctgccgtcgccacgccgatgctgcaggacatggccgaaaaggctccggct
gcggaataa
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