Rhizobium leguminosarum bv. trifolii WSM1689: RLEG3_23085
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Entry
RLEG3_23085 CDS
T03009
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rlb
Rhizobium leguminosarum bv. trifolii WSM1689
Pathway
rlb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rlb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RLEG3_23085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlb03400
]
RLEG3_23085
DNA repair and recombination proteins [BR:
rlb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RLEG3_23085
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RLEG3_23085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
AAA_16
SWI2_SNF2
Microtub_bd
UB2H
Motif
Other DBs
NCBI-ProteinID:
AHF84523
LinkDB
All DBs
Position
2551097..2554174
Genome browser
AA seq
1025 aa
AA seq
DB search
MAKSPKKSPAPNGFEEAPQSSFEGAPLSGSVADWVKQLEADAEASGVETQRQIASKAGKH
RKKVEIASRTKTSDGGVSASKSARGTSMGGSTDPKTRAAAGLNPVSGMDTTLEEASSLQA
GTAVTATVEALSALIESGNPLHKNGKIWTPHRPARPDKSEGGIAIRMQSDYEPAGDQPTA
IRDLVEGLENGDRSQVLLGVTGSGKTFTMAKVIEATQRPAVILAPNKTLAAQLYSEFKNF
FPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSINEQIDRMRHSATRSLLERDDCIIVA
SVSCIYGIGSVETYTAMTFQMSVGDRLDQRQLLADLVAQQYKRRDMDFTRGSFRVRGDTI
ELFPAHLEDAAWRISMFGDEIDAITEFDPLTGQKVGDLKSVKIYANSHYVTPRPTLNGAI
KSIKEELRLRLAELEKAGRLLEAQRLEQRTRYDIEMLEATGSCQGIENYSRYLTGRDPGD
PPPTLFEYIPDNALVFIDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPLRFE
EWDAMRPDTIAVSATPGSWEMEQSGGVFAEQVIRPTGLIDPPVEVRSARSQVDDVLGEIR
ETSAKGYRTLCTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEILRDLRLGAFDVL
VGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYADQVTGS
MKRAMEETSRRREKQMIYNQEHGITPESVKARISDILDSVYERDHVRADISGVSGKGFAD
GGNLVGNNLQTHLNALEKSMRDAAADLDFEKAARLRDEIKRLKAAELAVMDDPMAREEAR
NQEGGKRNGKANRESISPPVGEMSGRTEGGATTSKSLFQKPSIDDMGPGTDTTTPLFRKP
ALDEMGRDIAEPTKKTLFRKNDLDEMTVGRTEKPVTGALPEKPDGEARYAKRSNRSSESI
AATNARSASEGQKGTKRFSPLLEGQPERDDVRPVVRGKTGVGSYEDPGEQKRKGRTKGKT
GRPGR
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatctccgaagaaatctcccgccccgaatggcttcgaggaagcccctcaatcg
tcttttgagggagccccgctctcaggctcggttgccgattgggtgaagcagctggaggcc
gatgccgaagcctcgggcgtcgagacacagcgccagatcgcctccaaggccggcaagcat
cgcaagaaggtggaaatcgcctccaggacgaaaaccagcgacggcggcgtcagcgcgtcg
aaatcggcgcgcggcacctccatgggcggctcgaccgacccgaagacgcgtgcggccgcc
ggcctcaatcccgtctccggcatggacacgacgctggaagaagcctcatcgctgcaggcg
ggcaccgccgtcaccgccacggtcgaggcgctgtcggcgctgatcgagagcggcaatccg
ctgcacaagaacggcaagatctggacgccgcaccgccctgcccggcccgacaaatccgaa
ggcggcatcgccatccgcatgcagtcggactacgagccggccggcgatcagccgaccgcc
atccgcgatctcgtcgaggggctggagaatggcgaccgcagccaggtgctgctcggcgtt
accggctcgggcaagaccttcaccatggccaaggtgatcgaggcgacgcagcgcccggcc
gtcatcctggcgccgaacaagacgctggccgcccagctctattccgaattcaagaatttc
ttccccgacaatgcggtggaatatttcgtttcctactacgattattaccagccggaagcc
tatgtgccgcgctccgacacctatatcgagaaggaaagctcgatcaacgagcagatcgac
cgcatgcgccactcggcgacgcgctcgctgctcgaacgcgacgactgcatcatcgtcgcc
tcggtctcctgcatctatggtatcggctcggtcgagacctatacggcgatgaccttccag
atgtcggtcggcgaccggctcgaccaacgccagctgctggccgacctcgtcgcccagcaa
tataagcgccgcgacatggatttcacccgcggatccttccgggtgcgcggcgatacgatc
gagctcttccccgcccacttggaagatgccgcctggcgcatctcgatgttcggcgacgag
atcgacgccatcaccgaattcgacccgctcaccggccagaaggtcggcgatctgaaatcg
gtgaagatctacgccaattcgcactatgtcaccccgcgcccgacgctgaacggcgccatc
aagtcgatcaaggaagagctcaggctgcgccttgccgagctcgaaaaggccggccgcctg
ctggaggcccagcgcctggagcagcgcacccgctacgatatcgaaatgctcgaagcaacc
ggctcctgccagggcatcgagaactattcgcgttacctcaccggccgcgaccccggcgat
ccgccgccgacgcttttcgaatatatccccgacaacgccctcgtcttcatcgacgaaagc
catgtcaccgtgccgcagatcggcggcatgtaccggggcgacttcaggcgcaaggcgacg
ctggccgaatacggcttccgcctgccctcctgcatggacaaccggccgctgcgcttcgag
gaatgggacgccatgcgccccgataccatcgccgtctcggccaccccgggcagctgggag
atggaacaatccggcggcgtcttcgccgaacaggtgatccgcccgaccggcctgatcgac
ccgccggtcgaggtccgctcggcccgcagccaggtcgacgacgtgctcggcgagatccgc
gaaacatcagccaagggctaccgcactctctgcaccgtgctgaccaagcgcatggccgag
gacctgaccgaatatctgcatgagcagggcgtgcgcgtccgctacatgcactccgacatc
gacacgctggaacgtatcgagatcctccgcgatctccgccttggcgccttcgacgtgctc
gtcggcatcaacctcttgcgcgaaggcctcgacattcccgaatgcggcttcgtcgccatc
ctcgacgccgataaggaaggcttcctgcgctcggagacatcgctgatccagacgatcggc
cgcgccgcgcgtaacgtcgacggcaaggtcatcctctatgccgaccaggtcaccggctcg
atgaagcgggcgatggaggaaaccagccgccgccgcgaaaagcagatgatctataaccag
gaacacggcatcacccctgaatcggtcaaggccaggatctccgacattctcgactcggtc
tacgaacgcgaccacgtccgcgcggatatctcaggcgtctcgggcaagggcttcgccgat
ggcggcaacctcgtcggcaacaacctgcagacccatctcaacgcgctcgaaaagagcatg
cgcgacgccgccgccgacctcgacttcgaaaaagccgcccgcctccgcgacgaaatcaaa
cgcctcaaggccgccgaactggcggttatggacgatcccatggcgcgtgaagaagcccgc
aaccaggaaggcggcaagaggaacggaaaagccaaccgcgagtctatctccccacctgtg
ggggagatgtccggcaggacagaggggggcgccacgacctccaagtccctcttccaaaaa
ccctccatcgacgacatgggcccaggcaccgacaccaccacccctctcttccgcaaaccc
gctctagatgagatgggccgcgacattgccgaacccacaaagaagacccttttccgcaag
aacgacctcgatgagatgaccgtcggccgaacggaaaaaccggtcaccggcgcactgccg
gaaaagccggatggtgaggcgcggtacgcgaagcgtagcaatcgatccagtgaatcgatt
gcagcaacgaacgcccgaagcgcaagcgaagggcagaagggcacgaagcggttttcaccg
ctgcttgaagggcagccggagcgcgacgacgtgcggccggtcgtgcgcggaaagacgggc
gtggggagctacgaggaccccggcgagcagaagcgcaaggggcggacgaaggggaagact
gggcggccggggcggtaa
DBGET
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