Rhizobium leguminosarum bv. trifolii WSM1689: RLEG3_24700
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Entry
RLEG3_24700 CDS
T03009
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rlb
Rhizobium leguminosarum bv. trifolii WSM1689
Pathway
rlb03420
Nucleotide excision repair
rlb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rlb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RLEG3_24700
03430 Mismatch repair
RLEG3_24700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlb03400
]
RLEG3_24700
Enzymes [BR:
rlb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RLEG3_24700
DNA repair and recombination proteins [BR:
rlb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RLEG3_24700
MMR (mismatch excision repair)
Other MMR factors
RLEG3_24700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DUF4420
Motif
Other DBs
NCBI-ProteinID:
AHF84814
LinkDB
All DBs
Position
2856896..2859373
Genome browser
AA seq
825 aa
AA seq
DB search
MSNSFDDMPFFDEEPGEMARKPQPPAAPAERAAAGGGIAARAMAARDGGKRPDYLAGLNP
EQTEAVETLEGPVLVLAGAGTGKTRVLTTRIAHILNTGRAFPSQILAVTFTNKAAREMKE
RIALLVGGAVEGMPWLGTFHSIGVKLLRRHGELVGLRSDFTILDTDDVVRLIKQIIQAEG
LDDKRWPAKQFAGMIDTWKNKGLGPADIPEGDARAFANGRGRDLYFAYQNRLTTLNACDF
GDLLMHPIAIFRKNPDLLKEYHGRFRYILVDEYQDTNTAQYMWLRLLAQRSKGEPQNVCC
VGDDDQSIYGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTEHILGAAAHLIAHNEGRLG
KTLFTDRSNPDDVKVQVHASWDSEEEARAIGEEIEQLQRGKHLLNDMAILVRASFQMREF
EDRFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVAQASDDLAFERIVNTPKRGLGDTTV
RALHDYARARDIPMLAAAVDIIETDELKPKARKALFDVIQSFRRWQELLENTPHTELAEQ
ILEESGYTDMWKNDKSAEAPGRLENLKELIRSMESFESMRGFLEHVSLVMDAETNENLDA
VSIMTLHSAKGLEFDTVFLPGWEEGLFPHQRSLDESGRAGLEEERRLAYVGITRAKHRCH
IWFVSNRRIHGLWQSTLPSRFLDELPETHVEVAAMEQSYGGYGRGGYGQSRFDKAEPFAN
SYSTPGWKRAQANKTDATRDNWGTRSGHAVERIGYGESGPKGRTIEGELVAKSTSSEPSR
FTLGDRVFHLKFGNGNITGIEGNKLTIEFDRAGQKRVLDGFVERV
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatagtttcgacgatatgcccttcttcgacgaagagccgggcgagatggcgcgc
aagccgcagccgcctgccgcccccgccgaaagggccgccgctggtggcggcatcgctgcc
cgcgccatggcggctcgcgacggcggcaagcgaccggattatctcgccgggctgaacccc
gagcagaccgaagccgtcgaaacgctggaaggccccgtcctcgtgctcgccggcgccggc
accggcaagacccgcgtgctgacgacccgcatcgcccatatcctcaataccggccgcgcc
ttcccctcgcagatcctcgccgtcaccttcaccaacaaggcggcccgcgagatgaaggag
cgtatcgcgttgctggtcggtggcgccgtcgaaggcatgccctggctcggcaccttccac
tcgatcggcgtcaagcttctgcgccgccatggcgagctcgtcggcctgcggtccgatttc
accattctcgacaccgacgacgtcgtccgcctgatcaagcagatcatccaggccgaaggc
ctcgacgacaagcgctggccggccaagcagttcgccggcatgatcgacacctggaagaac
aagggtctcggccccgccgatatccccgagggcgacgcccgcgcctttgccaatggccgc
ggccgcgatctctattttgcctatcagaaccgcctgacgacgctgaacgcctgcgacttc
ggcgacctgctgatgcatccgatcgcgatcttccgcaagaacccggatctcctgaaggaa
tatcacggccgcttccgctatatcctcgtcgacgagtaccaggataccaacaccgcccag
tacatgtggctcaggcttctcgcccagcgctccaagggcgagccgcagaacgtctgctgc
gtcggcgacgacgatcagtcgatctatggctggcgcggcgcggaggtcgacaatatcctg
cgcttcgaaaaggatttccccggcgccaaggtcatcaagctcgagcgcaactaccgctcg
accgaacatattctgggggccgccgcccatctgatcgcccataatgagggccgcctcggc
aagacgctgttcaccgaccgctccaatcctgatgacgtcaaggtgcaggtccacgcttcc
tgggattcggaggaggaagcccgcgccatcggcgaggagatcgagcagctccagcgcggc
aagcatctcttgaacgacatggcgatcctcgtgcgcgcctccttccagatgcgcgaattc
gaagaccgcttcgtcaccctcggcctcaactatcgcgtcatcggcggcccgcgcttctat
gagcgcctcgaaatccgcgatgccatggcctatttccgcctcgttgctcaagcctctgac
gacctcgctttcgaacgcatcgtcaacaccccgaagcgcggcctcggcgatacgacggtg
cgggcgctgcacgactatgcccgtgcccgggatatcccgatgcttgcggcagcagtcgac
atcatcgagacggacgagttgaagccgaaggcgcgaaaagccctcttcgacgtgattcaa
tctttccgccgatggcaggaactgcttgaaaacacgccgcataccgaacttgccgagcag
atcctcgaagagtccggctataccgacatgtggaagaacgacaagagcgctgaagccccc
ggccgcctcgaaaacctcaaggaactgatccgctcgatggaaagcttcgagtcgatgcgc
ggtttcctcgaacacgtctccctggtgatggatgccgagaccaacgagaacctcgacgcc
gtctcgatcatgacgctgcactcggccaagggcctggaattcgacaccgtcttcctgccg
ggctgggaggaaggcctcttcccgcaccagcgctcgctggatgagagcggccgcgccggc
ctcgaggaggaacgccgcctcgcctatgtcggcatcacccgcgccaagcaccgctgccac
atctggttcgtctccaaccgccgcatccatggtctctggcaatcgaccctgccctcgcgt
ttcctcgatgaactgccggaaacccatgtcgaggtcgccgcaatggagcagagctacggc
gggtatggccgcggcggctacggccagtcccgcttcgacaaggccgaacccttcgccaac
tcctattccactcccggctggaaacgcgcccaggccaacaagaccgacgctacacgcgac
aattggggcacccgctccggccacgccgtcgaacgcatcggctacggcgagagcggcccg
aaggggcgcaccatcgaaggcgaactggtggcgaaatcgacatcgtcggaaccgtcgaga
ttcacgcttggcgaccgcgtgttccacctcaaattcggcaacggcaacatcactggcatc
gaaggcaacaagctgacgatcgagttcgaccgggcgggacagaaacgggtgctggacgga
tttgtcgagcgcgtctga
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