Rhizobium leguminosarum bv. trifolii WSM1689: RLEG3_25405
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Entry
RLEG3_25405 CDS
T03009
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rlb
Rhizobium leguminosarum bv. trifolii WSM1689
Pathway
rlb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rlb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RLEG3_25405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rlb03019
]
RLEG3_25405
03400 DNA repair and recombination proteins [BR:
rlb03400
]
RLEG3_25405
Enzymes [BR:
rlb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RLEG3_25405
Messenger RNA biogenesis [BR:
rlb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RLEG3_25405
DNA repair and recombination proteins [BR:
rlb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RLEG3_25405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HHH
ResIII
GARS_N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AHF84947
LinkDB
All DBs
Position
complement(2994295..2996163)
Genome browser
AA seq
622 aa
AA seq
DB search
MSLTERNEPGFSASGALFSSGRSPLDILKQVYGYSSFRGKQQQVVEHVVSGGDAVVLFPT
GAGKSLCFQIPALCRDGVGIVVSPLIALMRDQVEAMKQLGIRAAALNSSLSREEFVEVRR
ALSAGQLDLLYVTPERILTDGFRELIANEKIALFAIDEAHCVSQWGHDFRPEYRELGRLG
EQYPGVPRVALTATADPHTRDDMIERLGLDSAEIFTTSFDRPNIAYEIVERDQPRQQLLR
FLSGHKGDSGIVYCLSRAKVEDTAEWLNGQGIRARAYHAGMDRAVRDANQDAFLKEENLC
LVATVAFGMGIDKPNVRYVAHLDLPGSVEAYYQETGRAGRDGLPSEVWMAYGMADVIQRG
RMIDEGSAAAEIKRVERAKLNALLAICETASCRRQAILAHFGEAHAGHCGNCDTCLKPVE
TWEGTDAAIKALAAVYRTGERFGAGHVIDVLLGHVNEKTERFGHAEMPVFGAGKDIPARV
WQSVFRQLLAMGLIRVDHEAFGALKLEPEARAVFKHERQVFFRKDRPASERRTKKAERSE
RKSGLSGADGSLFEALRAERMAIAKSLGVPPYVVFPDTTLIAFATERPRSRKELLAISGV
GQAKLERYGDAFLEIILAQDNG
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgactgaacgaaacgaaccgggcttttccgcttccggcgcgctgttttcttcc
ggccgctcgccgctcgatatcctcaagcaggtctacggctattcctccttccgcggcaag
cagcagcaggtggtcgagcatgtggtttccggcggcgatgcggtcgtgctctttcccaca
ggcgccggcaagtcgctgtgcttccagatcccggcgctctgccgcgatggcgtcggcatc
gtcgtttcgccgctgattgcgctgatgcgcgatcaggtggaggcgatgaagcagctcggc
atccgcgccgcagcactcaactcgtcgctgtcgcgcgaggagttcgtcgaggttcgccgc
gcgctttcggcgggccagctcgaccttctctacgtgacgcccgagcgcattttgaccgat
gggttccgtgagctgatcgccaacgagaagatcgcgctatttgcgattgacgaggcccat
tgcgtctcgcaatggggccatgatttccggccggaatatcgcgaactcgggcggctcggc
gagcaatatcccggtgtgccccgcgtggcgctgacggcgacggccgatccgcatacgcgc
gacgacatgatcgagcggctgggtttggattctgccgagatcttcaccaccagtttcgac
cgtccgaacatcgcctacgagatcgtcgagcgtgatcagccgcgccagcagctgctgcgg
ttcctgtccggccacaagggcgacagcggcatcgtctattgcctgtcgcgcgccaaggtc
gaggatacggccgaatggctaaacgggcagggcattcgcgcccgcgcctatcatgcaggc
atggacagggcggttcgtgacgccaatcaggatgccttcctgaaagaagagaacctctgt
ctggtcgccaccgtcgccttcggcatgggcatcgacaaaccgaacgtgcgttatgtcgcc
catctcgacctgccgggttcggtggaagcctattatcaggagactgggcgcgccggccgc
gacggcctgccgtccgaagtctggatggcctatggcatggccgacgtcatccagcgcggc
cggatgatcgacgagggcagcgctgccgcggagatcaaacgggtcgaacgcgccaagctc
aacgcattgctggcgatctgcgagaccgcctcctgccgccgccaggcgatccttgcccat
ttcggcgaggcgcatgccggccattgcggcaattgcgacacctgcctgaagcccgtcgag
acctgggagggcacggacgcggcaatcaaggcgttggcggccgtctaccgcaccggcgag
cgtttcggcgctggccatgtcatcgatgtgctcctcggccacgtcaacgaaaagaccgaa
cgcttcggtcatgccgaaatgccggtcttcggcgccggcaaggatattccggcgcgcgtc
tggcagtcggtcttccgccagttgcttgccatggggctgatccgtgtcgaccacgaggcc
ttcggggcgctgaagctggagccggaggcgcgtgccgtcttcaagcacgagcgacaggtg
ttcttccgcaaggaccgcccggcctcggaacggcgcacgaagaaggcggagcgcagcgag
cgcaaatcgggactatcaggcgccgacggcagtctcttcgaggcgcttagggccgagcgc
atggcgatcgccaaatcgctcggcgtgccgccctatgtcgtctttcccgatacgacgctg
atcgccttcgccacggagcggcctcgcagccgcaaggaattgctcgccatatcaggcgtc
gggcaggcgaagctcgaacgttacggcgatgccttcctggagatcatcctggcacaggac
aacggctga
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