Rhizobium leguminosarum bv. trifolii WSM1689: RLEG3_25470
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Entry
RLEG3_25470 CDS
T03009
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rlb
Rhizobium leguminosarum bv. trifolii WSM1689
Pathway
rlb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rlb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RLEG3_25470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlb03400
]
RLEG3_25470
Enzymes [BR:
rlb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RLEG3_25470
DNA repair and recombination proteins [BR:
rlb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RLEG3_25470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
DUF2026
Motif
Other DBs
NCBI-ProteinID:
AHF84960
LinkDB
All DBs
Position
complement(3012487..3013941)
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AA seq
484 aa
AA seq
DB search
MRRVVLAGRGELAEWRDAARAFAAAGISPEGIEWREKRAESGFAFQHDAMPPAPAAARRP
MTVPPAFIELAETVLCHSDPTRFSLLYRLLWRLQMDRQLLEVASDEDVARARLMAKNVRR
DAHKMTAFVRFKEVGAVSADRRKFLAWFEPDHHIVRRTAPFFQRRFTDMDWLIATPKGSA
AWDGERLTMSDEPCEKPNLTDVTDDLWRTYYASIFNPARLKLKAMQAEMPKKYWKNLPEA
DLIPGLIASAESKVRAMAAREATQSLPFHDRLQEAARSIPAEPEAPAGTLEALRAEAAGC
TRCPLHAKATQTVFGEGPRDAEVMFVGEQPGDQEDISGRPFVGPAGRLLDQVITEAGIDR
STLYVTNAVKHFKYEPRGKRRIHQKPNMGEVKHCRWWLDLEMALIKPKLVVAMGATALAA
LTDTKQRLQDVRGKAIAIDEKRTLFVTVHPSYLLRIPDERLKAEELARFREDMLNIQRLM
TATG
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgggtcgtgctggcaggacgcggggagcttgccgaatggcgtgatgccgcacgc
gccttcgcggccgccggcatatcgccggaggggatagagtggcgcgaaaaacgtgctgag
tccgggtttgcgtttcaacacgacgcgatgccgccggcacctgctgctgcacgaaggccg
atgacggtgccacccgcctttatcgagcttgcggaaacggttctctgccattccgatccc
acgcgcttttccctgctttaccgtctgctctggcggctgcagatggaccggcaattgctt
gaagtggcctccgacgaggacgtcgcccgtgccaggttgatggcgaaaaacgttcggcgc
gacgcgcacaagatgacggccttcgtccgcttcaaggaggttggtgcggtatcggcggat
cgtcgaaaattcctcgcctggttcgagccggatcaccatatcgtcaggcgtacagcgccc
ttcttccaacggcgcttcaccgacatggactggctgatcgccacacccaagggatcagcc
gcctgggacggcgagcggctgacgatgagcgacgaaccgtgtgaaaaacccaatcttacc
gatgttaccgatgacctctggcgcacctactacgccagcattttcaatccggcgcggttg
aagctgaaggcgatgcaggcggagatgccaaaaaaatactggaagaacctgccggaagcc
gatctcattcctgggctgatcgcatcggcggagagcaaggtgcgggccatggccgcccgg
gaggcgacccagtcattgccctttcacgatcgcctgcaggaggccgcgcgcagcatccca
gctgaacccgaagcgccggcgggcacgctggaagcactgcgcgcggaagctgccggctgc
acccgctgtccgcttcacgcgaaggcgacgcaaactgtattcggggaggggccgcgcgat
gcagaggtgatgttcgtcggcgagcagccgggcgaccaggaggatatatcagggcgcccc
ttcgtcggtcccgccggcaggctgctggaccaagtgatcactgaagcgggcatcgaccgc
tcgacgctttacgtcaccaatgccgtcaagcatttcaaatatgagccgcgcggcaagcgt
cgcatccatcagaagcccaatatgggcgaggtgaagcattgccgctggtggctcgatctg
gagatggcgctgatcaagccgaagctggtcgttgcgatgggggcgacggcgctcgcggcg
ctgaccgatacgaaacagcggctgcaggatgtcagggggaaggcgatcgcgatcgacgag
aagcgaacgctcttcgtgacggtgcatccatcctatctgctgcgtattcccgacgagcga
ctgaaagcggaagaactggcgcgattccgtgaagatatgctgaatatccagcggcttatg
acggcgaccggataa
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