Rhizobium leguminosarum bv. trifolii WSM1689: RLEG3_32405
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Entry
RLEG3_32405 CDS
T03009
Name
(GenBank) ATP-dependent DNA helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rlb
Rhizobium leguminosarum bv. trifolii WSM1689
Brite
KEGG Orthology (KO) [BR:
rlb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlb03400
]
RLEG3_32405
Enzymes [BR:
rlb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RLEG3_32405
DNA repair and recombination proteins [BR:
rlb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RLEG3_32405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_19
DEAD
AAA_30
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AHF86244
LinkDB
All DBs
Position
complement(4459370..4462921)
Genome browser
AA seq
1183 aa
AA seq
DB search
MSDVTALPNDDDPGAWIGWTTIQQAIASDPLRSAWVSANAGSGKTHVLTQRVIRLLLAGA
RPSAILCLTYTKAAASEMSNRVFERLAEWVVLDDEDLGRRITQIEGRPPDGLKLAEARRL
FAKALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAAVALLSDARRALLTAT
APDEDSALAEAFAYVLNLGDESGLENLLGDIVANRNAIRRFTATAEQQGGVEMVLRKRLG
LAAGDTEDSIAVQYWPLPALSGGTLELYLSLADQKGGAKAQEVAYGLRLVGRERDDARRA
QFLEKIFLTVKGEPKADSQFFVKAMLAEAPQLAEAIAIARAHVAASRDRLKLMRMYGATH
AALVLADRLNHDYEELKKQRSQLDFEDLITRTAGLLTKSGVGPWIHYKLDRGIDHILVDE
AQDTSPIQWSVIQSLAEDFFSGESARPIVRTLFAVGDEKQSIYSFQGARPERFSEESDRT
RRRVSDSGQSFSSVRLPLSFRSTADVLEAVDHIFKTPENARGLSALGEPVVHRSSRIGHP
GAVDLWEMVAPDAVVKEEDWTAPFDATPESAPAAILARRIAHSIGTLVGRETIVDKGKER
LIEAGDILVLVRKRDAFVNALTRALKRRGDIPVAGADRLVLTSHIAVQDLLALGRFLLLP
EDDLSLAAVLKSPLFDLSEDDIFAIAALRGDNESVWSHLKSFAADGTERFRAAVERLELF
LRQSRSLSVHDFYARVLGSYGGRRQFLARLGTEVSDILDEFLTFTLDHESSGRPGLQSFI
STLELEAPVMKREQDKGRNEVRIMTVHASKGLEAPIVFLVDGGSKAFTHTHLPKLRLIET
GVDEPPMPVWVPVSDLANSLTQDDATRIQMLAEEEYRRLLYVAMTRAADRLVVCGYRGVR
VNNDTWHMMISTALRDDHPHVEETIFSGSDGEWPGIKWRVPRVERRFERVDRSQERGSEE
TLPAGLLRPLPPQAELPRPLSPSGAGTIIDEDEGGLLVVSPLFSEKERSDRSLEKGRLIH
RMLQALPEIPLGERPDAASRYAERAARFWPEAERRKLVDSVLKLLDEEGLQAVLGAQAQP
EVSIMGTLTLEDRRYAVSGRIDRLAVLADRVVILDYKTNRVPPATEEAIPFAHRAQLAIY
REILTPLYPDKRIDCMLVYTENASLFTLSEKALGLALAAVKTK
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgtgaccgcccttcccaacgacgacgatccgggcgcctggatcggctggaca
acgatccagcaggcgattgcctccgatccgctgcgttcggcatgggtctcggccaatgcc
ggttccggcaagacacacgtgctgacacagcgcgtcatccggctgctgcttgcgggcgcg
cggccttccgccattttatgcctcacctacaccaaggccgcggcgtcggaaatgtcgaac
cgcgtcttcgaacggctggcggaatgggtggtgcttgacgatgaggacctcggccggcgc
atcacacagatcgaaggtaggcctcccgacggactgaagcttgccgaggcccgccggctg
tttgccaaggcgctggagacacccggcggactgaagatccagacgatccatgccttttgt
gaggcactgctgcatcagttcccgttggaagccaacgttgccgggcatttctcggttctc
gacgatcgcgcggcggtggcgctgctttccgatgcgcgccgggcgctgctgacggcaacg
gcgcctgacgaagacagcgcccttgccgaggcattcgcctacgtgctcaatctcggcgac
gaatccgggctggagaacctgctcggcgatattgtcgctaaccgcaatgccattcgtcgt
ttcaccgcgacggccgaacagcagggcggcgtggaaatggttctgcgcaaaagactcggc
cttgccgccggcgacacggaagacagcatcgcggtgcaatattggcctttgcccgcgctt
tcgggcggcacgctggagctttatctttcgcttgccgatcagaagggcggtgcgaaggcg
caggaggttgcctacggcctcaggctcgtcgggcgggagcgcgatgacgcaaggcgcgcg
caatttctcgagaaaatctttctgaccgtgaagggcgagcccaaggcggactcgcaattc
ttcgtcaaggctatgcttgccgaggcgccgcagctggcggaggccatcgccattgcccgc
gcgcatgtcgcagccagccgcgaccgactgaaactgatgcggatgtacggcgccacgcat
gcagcgctcgtgctcgccgatcggctgaatcacgactatgaggagttgaagaagcagcgc
agccagctcgatttcgaggacctgatcacccgcaccgccggcctgctgacaaaaagtggc
gtcggcccctggatccactacaagctcgatcgcggcatcgaccatatcctcgtcgacgag
gcgcaggataccagcccgatccagtggagcgtcatccagtcgctcgccgaagattttttc
tccggcgaaagcgcccggccgatcgtgcgcacgctttttgccgtcggcgacgaaaagcag
tcgatctattccttccagggggcaaggcccgagcgtttttccgaggagagcgaccggacg
cggcggcgcgtttccgatagcgggcagagtttttcttcggtgcggctgccgctgtcgttc
cgctcgactgccgacgtgctcgaggcggtcgaccacattttcaagacacccgagaacgcg
cgcggccttagcgcgctcggcgaaccggtcgtgcatcgttccagccgcatcggacatccc
ggcgccgtcgatctctgggagatggttgcgccggatgcagtggtgaaggaagaggactgg
acggcgcccttcgacgcgacgccggaaagcgcgccggccgcaatcctcgcgcggcggatc
gcccactcgatcggcacgcttgttggccgtgaaaccatcgtcgacaaaggcaaggagcgc
ctgatcgaggccggcgacattctggtgctggtgcgcaagcgcgatgccttcgtcaatgcg
ttgacgcgcgcgttgaagcgccgcggcgatattcccgtcgccggtgcggacaggctggtg
ctgaccagccatatcgccgtgcaggatctgctggcgctcggccgtttcctgcttctgccg
gaagacgatctttcgctcgccgccgtgctgaagagcccgcttttcgatctctccgaggac
gacatctttgcgatcgccgcgttgcgcggcgacaatgaaagcgtctggagccatctcaaa
agcttcgccgccgacggcaccgagcgtttccgtgctgccgtcgagaggctggagctgttt
ctccggcagtccaggagcctgtcggttcacgatttctatgcgcgcgtgctgggcagctat
ggcgggcggcggcaattccttgcccgtctcggcaccgaagtcagcgatattctcgacgaa
ttcctgaccttcacgctcgaccacgagagctccggtcgtcccggtctgcaatccttcatc
tcgacgctggagctcgaagccccggtaatgaagcgcgagcaggacaaggggcgcaacgag
gtgcggatcatgacggtgcatgcctccaagggtcttgaagcaccgatcgttttccttgtc
gacggtggttcgaaggccttcacccatacgcatctgccgaagcttcgcctgatcgagacc
ggtgttgacgagccgccgatgcccgtctgggttcctgtctccgatctcgccaattcactg
acccaggacgatgcgacgcgtatccagatgctggccgaagaagaataccgtcggttgctc
tatgtcgccatgacgcgcgccgccgaccggctggtcgtctgcggctatcgtggcgtgcgt
gtgaacaatgacacttggcatatgatgatttcgacggcattgcgcgacgaccatccgcat
gtggaggagaccatattctccggttccgatggggaatggccgggcatcaaatggcgcgtg
ccgcgggtggaacgacgcttcgaacgtgtcgatcgcagccaagagcgtggcagcgaggag
accctgccggccggcctgttgcggccattgccgccgcaggctgagctgccccggccgctc
agcccttccggcgccgggacgatcatcgatgaagacgagggcggcctgctggtcgtctcg
ccgctgtttagcgaaaaggagcgcagcgatcgttcgctggagaaaggcaggctgatccat
cgcatgctgcaggcgcttcccgaaattccgcttggcgagcgacctgatgcggcgagccgc
tatgcggaaagggcggcacgattctggccggaagccgaaaggcgcaagcttgtcgattcg
gttctgaaactattggacgaggaaggtctgcaggctgttctcggtgcacaggcccagccc
gaggtctcgatcatgggaacattgacgctcgaagatcggcgctatgccgtctccggccgc
atcgaccggcttgccgtccttgccgatcgcgtcgtcattctcgactacaagaccaatcgg
gtgccgccggcaacagaggaggctatccccttcgcgcaccgggcgcagctggcgatctat
cgcgagatcctgacgccgctctatcctgataagcgtatcgattgcatgcttgtctatacc
gagaacgcttcgctcttcacgctgagcgaaaaggcgctcggtttggcgcttgcagcggtc
aagacaaagtga
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