Rhizobium leguminosarum bv. trifolii WSM1689: RLEG3_33280
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Entry
RLEG3_33280 CDS
T03009
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rlb
Rhizobium leguminosarum bv. trifolii WSM1689
Pathway
rlb03030
DNA replication
rlb03410
Base excision repair
rlb03420
Nucleotide excision repair
rlb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rlb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RLEG3_33280
03410 Base excision repair
RLEG3_33280
03420 Nucleotide excision repair
RLEG3_33280
03440 Homologous recombination
RLEG3_33280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rlb03032
]
RLEG3_33280
03400 DNA repair and recombination proteins [BR:
rlb03400
]
RLEG3_33280
Enzymes [BR:
rlb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RLEG3_33280
DNA replication proteins [BR:
rlb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RLEG3_33280
DNA repair and recombination proteins [BR:
rlb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RLEG3_33280
NER (nucleotide excision repair)
GGR (global genome repair) factors
RLEG3_33280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
Transposase_20
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
AHF86408
LinkDB
All DBs
Position
4647764..4650763
Genome browser
AA seq
999 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHALPPLTRKTDGLPIGAVSGFCNMLWKLLRDARNTDVGVT
PTHLAVIFDYSAKTFRKDLYNAYKANRSAPPEELIPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEATGADVTIVSSDKDLMQLVSPNVHMYDSMKDKQIGIPDVIEKWGVPPE
KMIDLQAMTGDSVDNVPGIPGIGPKTAAQLLEEYGDLDTLLERATEIKQVKRRETILANI
DMARLSRDLVRLRTDVPLDLDLDGLVLEPQNGPKLIGFLKTMEFTTLTRRVAEACDCDAS
AIEPAIVRIEWGETARGPDLDAAEPEPVAGGIPDVSGESVPVPPRAKAKTAVEGAFSPAD
LAKARAEAFATLPFDHSTYVTIRDLATLDRWIADARATGLVAFDTETTSLDAMQAELVGI
SLAIADNTADPTGTKIRAAYVPLVHKNGVGDLLGGGLAENQIPMGDALPRLKALLEDESV
LKVAQNLKYDYLLMKRYGIETRSFDDTMLISYVLDAGTGAHGMDPLSEKFLGHTPIPYKD
VAGSGKANVTFDLVDIDRATHYAAEDAEVTLRLWLVLKPRLAAAGLTSVYERLERPLLPV
LARMEARGITVDRQILSRLSGELAQSAARLEDEIYVLAGERFNIGSPKQLGDILFGKMGL
AGGSKTKTGQWSTSAQVLEDLAAAGFELPRKIVDWRQVTKLKSTYTDALPGYVHPDTKRV
HTSYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLISADYSQIELRVLA
HVAEIPQLTKAFEDGVDIHAMTASEMFGVPVEGMPGEVRRRAKAINFGIIYGISAFGLAN
QLSIERSEAGDYIKKYFERFPGIRDYMESRKAMARDKGYVETIFGRRINYPEIRSSNPSV
RAFNERAAINAPIQGSAADVIRRAMIKIEPALVEVGLADRVRMLLQVHDELVFEVEDEDV
EKAMPVIVSVMENATMPALEMRVPLRVDARAATNWDEAH
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcacctcttcctagtcgatggttccggattcatcttccgggcgttt
catgcactgccgccgctgacccgcaagaccgacggcctgccgatcggcgccgtgtccggt
ttctgcaacatgctgtggaagctgctgagggacgcgcgcaacaccgatgtcggcgtgacg
ccgacacatcttgccgtcatcttcgattattcggccaagacgtttcgcaaggatctctac
aacgcctacaaggcaaaccgttccgcgccgccggaagagctcatcccgcaattcggcctt
ataagagaggcgacccgcgccttcaatctgccctgcatcgagaccgaaggcttcgaggcc
gacgacatcatcgccacctatgcccgccaggccgaagcgaccggcgccgatgtcaccatc
gtctcctccgacaaggatctgatgcagctcgtcagccccaatgtccatatgtatgacagc
atgaaggacaagcagatcggcattccggatgtcatcgagaaatggggcgtgccgccggaa
aagatgatcgacctgcaggcgatgaccggcgattcggtcgataatgttcccggcattccc
ggcataggtccgaaaaccgccgcccagcttctcgaggaatacggcgatctcgatacgctg
ctcgaacgcgccaccgagatcaagcaggtcaagcgccgcgagacgatcctcgccaatatc
gacatggccaggctctcgcgcgatctcgtgcggctgcgcaccgatgtgccgctcgatctc
gatctcgacgggctggtgctggaaccgcagaacggtccgaagctgatcggcttcctgaag
acgatggaattcaccacgctgacgcgccgcgtcgccgaagcctgcgattgcgatgcgagc
gccatcgaaccggcgatcgtccgcatcgaatggggtgagacggcccgcggcccggatctc
gatgcggccgagcccgagcccgttgccggcggcatccccgatgtttccggcgaatccgtg
ccggtgccgccgcgtgcaaaggcgaagaccgcggtcgaaggcgccttttcgcccgccgat
cttgccaaggcgcgggccgaggcctttgcgacgctgcccttcgatcattcgacctatgtc
acgatccgcgatctggcgacgctcgaccgctggattgccgatgcgcgcgccaccggcctc
gttgctttcgataccgagaccacgtcgctggatgcgatgcaggccgagcttgtcggcatt
tcgctggcgatcgccgacaatacggccgatcccaccggcacgaagatccgtgccgcctat
gtgccgctcgtccataagaacggcgtcggcgatctgctcggcggcggcctcgccgaaaac
cagatcccgatgggcgatgccctgccacggctgaaggcattgctggaagacgaatcggtt
ctcaaggtcgcccagaacctgaaatacgattacctgctgatgaagcgctacggcatcgag
accaggagtttcgacgacacgatgctgatctcctacgtgctcgatgccggcaccggcgcg
catggcatggacccgctctcggaaaaattcctcggccataccccgatcccctacaaggac
gtggcgggcagcggtaaggcgaacgtcaccttcgatctggtcgatatcgaccgcgccacc
cactatgccgccgaagatgccgaggtgacgctgcgcctctggctggtgctgaagccgcgg
ctggcggcggcgggattgaccagcgtctatgaacggctggagcggccgctattgccggtg
ctggcgcgcatggaagcgcgcggcatcaccgtcgaccggcagatcctgtcgcgcctctcc
ggcgaactggcccagagtgcagcaaggctggaggacgagatctacgtgctggccggcgaa
cgttttaacatcggctcgccgaagcagctgggcgatatcctgttcggcaagatgggcctt
gccggcggcagcaagacgaagacaggccaatggtccacctccgcgcaggtgctcgaggat
ctggcggccgccggtttcgaattgccgcgcaagatcgtcgactggcgccaggtcaccaag
ctgaaatccacctataccgacgcgcttccgggttacgttcaccctgacacaaagcgggtc
catacctcctactcgctggcatcgaccaccacggggcgcctgtcctcgtccgagccgaac
ctgcagaatattccggtgcgcaccgccgaaggccgcaagatccgcaccgccttcatctcg
acgcctggccacaagctgatctctgccgactacagccagatcgaactgcgcgtgcttgcc
catgtggccgagatcccgcaactgaccaaggccttcgaagatggcgtcgacatccacgcc
atgacggcctcggaaatgttcggcgtgccggtggaaggcatgccaggcgaggtgcgccgc
cgcgccaaggcgatcaatttcggcatcatctacggcatctcggccttcggccttgccaat
cagctttcgatcgagcgttcggaagccggcgactacatcaagaagtatttcgagcgtttc
cccggcatccgcgactatatggaaagccgaaaggccatggcgcgcgacaagggttacgtc
gaaacgatcttcggccgccgcatcaactatcccgaaatccgctcgtccaatccatccgtg
cgcgccttcaacgagcgtgcggcgatcaacgcgccgatccagggttcggctgccgacgtc
atccggcgggcgatgatcaagatagagccggcgcttgttgaagtcggccttgccgatcgc
gtccgcatgctgctgcaggtgcatgacgaactcgtcttcgaggtcgaggacgaggatgtc
gaaaaggcgatgccggtcatcgtctctgtcatggagaacgccaccatgccggcgctggaa
atgcgtgtgccgctgagggtagatgcgcgcgctgccaccaattgggacgaggcgcactaa
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