Rubripirellula lacrimiformis: K227x_00730
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Entry
K227x_00730 CDS
T07352
Symbol
gyrA_1
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rlc
Rubripirellula lacrimiformis
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rlc03032
]
K227x_00730 (gyrA_1)
03400 DNA repair and recombination proteins [BR:
rlc03400
]
K227x_00730 (gyrA_1)
Enzymes [BR:
rlc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K227x_00730 (gyrA_1)
DNA replication proteins [BR:
rlc03032
]
Prokaryotic type
DNA Topoisomerases
K227x_00730 (gyrA_1)
DNA repair and recombination proteins [BR:
rlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K227x_00730 (gyrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
KH_DEAH11_1st
Motif
Other DBs
NCBI-ProteinID:
QDT01706
UniProt:
A0A517N3J0
LinkDB
All DBs
Position
104016..106889
Genome browser
AA seq
957 aa
AA seq
DB search
MADEDGIDENDEEGTSPEVEGSGGSDVYTGGGAGALRMIDQPIEDELRDSYLTYAMSVIV
SRALPDVRDGLKPSQRRILVAMNDLNLGPGAKRVKCAKISGDTSGNYHPHGESVIYPTLV
RMAQEWNLRRLLIDKQGNFGSIAGLPPAAMRYTEARLSSVAAAMLEDIKLDTVDYTPTYD
EVRTEPTVLPSKFPNLLINGSGGIAVGMATSIPPHNPTEVCDAVIALVENPELTVEDLFQ
IIPGPDFPTGGIVCGRAGIRRGYKTGRSTILVRGKCEIEEKKGTRSRILIREIPYQQTRD
GVVKKIAELVNGDRIKGISGIRDESDLKEPVRIVIELKRDADPDVVLNQLYQFSPLQTTI
SMIFLALVDGKPRELTLKEMLMEFIRHRVTVIRRRTQFLLARARRRKHSVEGLLLALANI
DEIIKTIRESRTQPEAKERLMGIACPASMMERALGETGFKQFQTERGVADSYPLTSVQTD
EILRMRLSQLVGLEQEKLSNEHRQLLEEILDYLDILGDQARIYSIIKEDLEDMKRRFGDA
RRTEISLEELGNIDLEDLITEETMVVSISHQGYIKRTPSSVYNTQRRGGKGLKGAKSDDE
DPIEHLFVASTHAYLLFLTTEGKVRWQKVYDLPQLARDAKGRAIVNLLNLEKDEKIAECL
AVRHFDQEGYYVVMATRSGLVKKTPLEQYSRPKRGGIIAIKLRDGDELVDAAVVGPGDEV
ILVTAGGMAIRFRESDSRPMGRNTSGVKGIGLQKGDEVVGMVVADPEATLLTVCENGYGK
RTPFGPNALGVDEEAGDEETSSSSARYRTQKRGGKGLRDIRTSERNGKVIGIARVGDGDE
IFMMTAKGKIQRIAAGDISVIGRNTQGVRIMNVDEGDSLIAVVRVPAEEASEGDAAAVAG
TPVDGAVVDGAEAEGTATEGTATETVASDDASAAADQVENSDENANDSDQDDASDSE
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
ttggcagacgaagacggcatcgacgaaaacgacgaagaaggcacatccccagaagtcgag
ggctcgggtggttccgacgtctataccggcgggggtgctggcgcgcttcggatgatcgac
caaccgatcgaagacgagcttcgggacagctatctgacgtacgcgatgagcgtgattgtc
agccgagccctgccggacgtccgagacggcctgaaaccgtcccagcggcggattttggtc
gcgatgaacgacttgaacctgggccccggtgccaaacgggtcaagtgtgccaagatttcg
ggggatacgtcgggaaactatcacccgcacggcgaaagtgtgatctatccgactttggtg
cggatggcccaggaatggaacctgcgtcgattgctgatcgacaaacaggggaacttcggc
agtatcgccggtttgccacctgccgcgatgcggtataccgaagcccgcctgtccagtgtc
gccgcggcgatgctagaggacatcaagctagatacggtcgactacaccccgacctatgac
gaagtgcgtaccgaaccgacggtattgcccagcaagtttccgaacctgttgatcaatggt
tccggcgggatcgccgtcggaatggcgaccagcattccgccgcacaacccgaccgaagtc
tgtgacgcggtgatcgcgttggtcgagaatccggaattgacggtcgaagatctgttccaa
atcatcccgggtccggacttcccaaccggcggcatcgtttgtggtcgagccggtatccga
cgtgggtacaagaccggacgcagcacgatcctggtgcgcggcaagtgcgaaatcgaagaa
aagaagggcacccgatcacggattctgatccgcgaaatcccttatcaacagactcgcgac
ggcgtggtcaaaaagatcgctgaactggtcaacggcgaccgcatcaaggggatctcgggg
atccgcgacgaaagcgatctgaaggaaccggtgcggatcgttatcgaactgaaacgggat
gccgacccggacgtggtgctgaaccagctgtatcagttctcgccgctgcagacgaccatc
tcgatgatcttcttggctctggtcgacggcaagccgcgcgaactgacgctgaaagagatg
ttgatggagttcattcgccatcgcgtcactgtgatccggcgtcgaacccagttcctgctg
gcccgtgcccgccgacgcaaacacagcgtcgaaggactgctgctggcacttgctaacatc
gacgaaatcatcaaaacgattcgcgaaagccgcacccagcccgaagccaaagaacggttg
atgggcatcgcgtgtccagcatcgatgatggaacgagcgctcggggaaaccggattcaaa
cagttccagaccgaacggggtgtggccgattcgtacccgctgaccagcgtccagacggac
gaaattttgcggatgcggttgagccagttggtcgggttggagcaagaaaaactgtccaac
gaacaccgacagttgctcgaagaaatcctcgattatcttgatatcctgggcgatcaggct
cggatctattcgatcatcaaggaagatctggaagacatgaaacgtcgcttcggcgatgcc
cgtcggaccgaaatttcgctggaagaactgggcaacatcgatctggaggacttgatcacc
gaagagacgatggtcgtgtcgatcagccaccagggttacatcaaacgtactccgtcgagc
gtttacaacacccaacgtcgtggcggcaagggactcaagggagccaagagcgacgacgag
gatccgatcgagcacctgtttgtcgccagcacgcacgcgtacctgttgttcctgaccacc
gagggcaaggtccgctggcaaaaggtttatgacctgccgcaattggctcgcgacgccaaa
ggccgggcgatcgtcaaccttttgaatctcgagaaggacgagaagatcgccgaatgcttg
gcggttcgtcacttcgaccaagagggctattacgttgtgatggcgacccgcagtggcttg
gtcaagaagacgccgctggaacagtacagccgacccaaacgtggcggcatcatcgcgatc
aaacttcgcgacggcgacgaattggtcgacgccgctgtcgttggccctggcgacgaagtg
attttggtcaccgccggtgggatggcgatccggttccgtgaatccgattcgcgaccgatg
ggacgaaatacatcgggagtcaaggggatcggtttgcagaagggtgacgaagtcgtcgga
atggtcgtggcggatcccgaagcgaccttgttgaccgtctgtgaaaacggttacggcaaa
cggactccgtttggacccaatgcactgggagtcgacgaagaagccggcgacgaagaaacc
agttcgtccagtgcccgttaccggactcagaagcgaggcgggaaaggtcttcgagatatc
cgcaccagcgagcgtaacggcaaggtgatcgggatcgcccgagtcggggatggtgacgaa
atcttcatgatgaccgccaaaggcaagatccaacggatcgccgcaggcgacatcagcgtg
atcggacggaacacccaaggcgtgcgaatcatgaacgtggacgaaggcgatagcctgatc
gcggtcgtgcgagtgcccgccgaagaagcatccgaaggggatgcagctgccgtggccgga
acgccggtggatggtgcagtggttgatggtgctgaagccgaagggacagcaaccgaaggg
acagcaaccgaaacggtagcttcggatgatgcatctgccgccgctgatcaggtcgaaaac
tctgacgaaaacgccaacgactcggatcaagacgacgcgtccgattcggaatag
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