Rubripirellula lacrimiformis: K227x_00940
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Entry
K227x_00940 CDS
T07352
Name
(GenBank) Cadherin domain protein
Organism
rlc
Rubripirellula lacrimiformis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
SdrD_B
Cadherin_4
Cadherin_CELSR2_9th
Dockerin_1
He_PIG
CarboxypepD_reg
Big_9
CarbopepD_reg_2
Motif
Other DBs
NCBI-ProteinID:
QDT01727
UniProt:
A0A517N3K8
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Position
132263..137785
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AA seq
1840 aa
AA seq
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MLESLEPRCLLASLSGDVFIDFDGNAVRGTSELGAADVRVYLDANENAQFDDGEPLTTTN
RHGSYQFTDLDPGDYSVRIIADPGDQTAPRVYLGTGYTSTGDGGGVNPTQLFEMSEDGRV
TAIGSPTTDRIHGLVRTNDGSLIGISYLTDSVYSIDPGTGQETVLAQAEQDVIGGLAYDS
QTDTIYTLASVGGALQLKIVDDQTGLLGDPAPITSELLALNYGSTFFDIDVSSGSVTEVP
RQTGSPFASTMDRRSDGVIFGLQGNDLKQFSFSAAGSTASTSSTLSSPIAAISFGADDQL
FGVSSSSVFHTIDVATGTVNVGVPITYNSKSISGIQGFDIGPHGTHYLVDATYLYTFNPS
TGVATRSPDRSFPPFSPIFTSLTAGPDGELFATLFSTDHPVAQIDPLTGRGSYLATDQAS
SSFASIVAGGVSGPTQGLSGFGNVSDLTFDPVRNRIVGFDNSSDQFFEFLPSGVGTVLAR
TDRSLDSWSLAFNGTDFVMFDNGDANKTSVITVNPDTGATSAGFQAGSRIPTEALFFATR
GDAAHRVTVADIDVNIETLDFGLAQAQSVGVSTTDYPIVISELVLETSGGLDHINQLVEL
RGEPDGQLGSNTYFVVVNESDSNPGMIREIIDLSDQPLGQNGYLVLTQAGSPHSVHPSSA
HLQGTTTGFGGLPGDLFSSSNALVPQLGGVGFEPSGYFLIQANQPPVIGDDIDEDDNGLA
DPDGLLADWNVLDSVSIHAAPRSVSQAYGQILLAEQELDEDPTTRTVEPGTPIVLARGSG
YAARVGESVGSDADDWIVGTPISSLTDRSGEKLELYGFGTQLPESKVYLERALDHFGEAN
FVGGVRGTIQSNPALGDLDPTQPVPPPTPAVGVSVLADTNGNRVRDVLDFNADPDLITGP
ILAGLIGTPDPFSQLGVIPLTHAFPGVTLSTTGSDNQPINFEVQAQRELSPFISGTNFFY
SYEGNFGWNDTRRLRVEFNNPVREVSIMAIGAPLGNQPHYGRLSAYNANDELIGTVLSNA
MLGGNRQSISVSSSSDNIAYAIAYADNTIDPNAAANGRFDGFTYRQSEIAAVTDDQGGYE
IKGLYPGQYDIVISNNASNSLLGLDPRSIEVIKYENFVVSSSARFNSAPGVEPEYSFTVS
ETAPVGTSIGVVAVDDPDGQPLTVSIVGDNPSGLVLDPSTGELLVGPNSVLDFETNNVIT
LRVQVDDGLVTAEATVIVNLTDANEAPVVNSVPFVVTEGTPSGTSLGQVTAIDLDEGATQ
QLTYEIVGGPSQNVFTMDPQSGTVTLVDAGAIDFEVAGELRFTVRVSDNSVPPMSTEFEQ
LVWIADQNDPPAVATTQINVPENTASRFVGTLVANDPDANQTHTFELLGGTGRDLFLVRP
NGTVEVRPGAVIDFEQGSQYTLHVRTIDSGAPPLANEATVNVSIIDVDELPELEVATATL
SEGAVAGDSVITLSAVDPDGGNVQTTITMLSGRDASNFQFDPNSGLLTVAPGAVLDFETM
PIQTVDFQIDSVGSDASNQVRLQIQLTDANDAPHITTNQVVISERAQSGAFAGRIRGIDP
DRGDTVTFAITGGNAQDRFVIDATSGIVRVAEGASFDADVVADPLSIEVQVTDDTGASSV
HVVRVVVNEVNEPPIFRYGPPAVSNVISGEFFEMHIPHDQVVDPEGREFTIAIFDQQGTL
PSWLTYHSDTRTLSGYATPQTVGQQTLTLRAFEPGPLELRTDTTFDLIVSAGQQPLTNKH
DRLDVDASNVVSPLDALRVINYISRYGSGASVNDPHPFAGFVDVSGDGMVTAFDALLILN
GLKQESSSPVSGEQIDAVLDDRDETNDHAMAEYLLESSLF
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atgctggagtcgctggaaccacgttgcctactggcttcactgtccggcgatgtcttcatc
gactttgacggcaacgcggtgcgagggacctctgaattgggggccgccgatgttcgtgtc
tatttggacgcgaatgaaaacgcacagtttgacgatggcgaacctttaacgaccaccaat
cgacatgggagttatcagttcacggacttggatcctggtgactactccgttcgcatcatc
gcggatcctggtgaccagacggcaccgcgggtgtatttgggaaccggctacaccagcaca
ggggacgggggcggcgtcaatccgactcagttgttcgagatgagtgaagacggacgggtc
actgcgatcggttcgccgaccacagaccgtatccatgggctggttcggaccaacgatgga
tcattgatcggaatcagctatctaacggactcggtctattcaatcgatccgggaaccggc
caagaaaccgtactggcgcaggccgaacaagacgtgataggcggtctggcatacgactcg
caaacggacacgatctatacgctggccagtgtcggcggtgcattgcagttgaagatcgtt
gacgatcagacggggttgttgggtgacccggcaccgatcacttcggaactgttggcgctg
aattatggcagcacattctttgacatcgatgtttcgtcaggatcggtgacggaagtgccg
cgccaaacgggcagcccattcgccagtacgatggaccgccgcagtgatggtgtcatcttt
ggtctgcagggcaatgatctgaagcagttttcgttttctgccgcaggctcgaccgcatcg
acatcatcgaccttgtcgtcgcccattgcagcgatcagttttggtgccgacgatcaactg
ttcggcgtcagcagcagttcggtgttccacacgatcgacgtcgccacggggacggtgaac
gtcggtgtgcccatcacgtataacagcaagtcgatttctgggatccagggattcgacatt
ggtccccatgggacacactatctggttgacgcgacttacctgtacacattcaatccgtcg
accggcgtggcgacgcgttcacccgatcgttcctttccgcccttttcgccaatcttcacg
tctttgacggctggtccggacggcgagttgttcgccacactgttcagcacggatcacccg
gttgctcagattgatccgttaaccggacgcggcagctatctggcaaccgaccaggccagt
tcatcctttgcatcgatcgtcgctggcggtgtcagcggtccaacgcaaggtcttagcgga
tttgggaacgtcagcgatctgacatttgacccggtccggaatcgtatcgtcggttttgac
aacagcagtgaccagttctttgaatttttgcccagtggcgtcggaaccgtgctggcccgc
accgaccgttcgcttgatagctggtcgttggcgttcaatgggacggattttgtcatgttc
gataatggtgacgcgaacaagacgtccgtgattaccgtcaacccggacaccggcgcgacg
tcagctggttttcaagctgggtcacgtatcccgaccgaagccctgttctttgccacacgc
ggcgatgccgcgcaccgggttacggttgccgacatcgacgtcaatatcgaaacgcttgat
ttcgggttggcacaggctcaatccgttggtgtctcgacgaccgactatcccatcgtcatt
agcgaattggtgttggaaaccagtggcggcttggaccatatcaatcaattggtcgagctt
cgcggtgaacccgatggtcaactcggatcgaacacttactttgtcgtcgtcaacgaatcc
gattcgaaccccggcatgatccgtgaaatcattgatcttagtgaccagccgctgggccag
aatggctatttggtactgacccaagcgggcagcccccatagcgtccaccccagcagtgca
cacctgcaagggaccaccacgggctttggtgggcttccaggagatctgttctcttcaagc
aatgcgctcgttccacagctgggcggtgtgggtttcgagcccagtggctatttcctgatc
caagccaatcagccgcctgtcatcggggacgacatcgacgaagacgataatggattggca
gaccccgatggtctcctagccgattggaacgtactggattcggtttcgattcacgctgct
cctcgaagcgttagccaagcgtatgggcagatcctgctggctgagcaagaactcgatgaa
gatcccaccactcgaacggtcgagcccggaacgccgatcgtccttgctcgcggatccgga
tacgccgctcgtgttggcgaatcggtcgggagtgatgcagatgattggatcgtggggacg
ccgatttcgtcgctcaccgaccgcagtggcgagaaactggaactctatggcttcggaact
caacttccggaatcgaaggtgtacctggaacgcgccttggatcacttcggcgaggcaaac
tttgtcgggggagtccggggaacgatccagagcaatccggcgctgggcgatctcgatccg
actcagcccgtaccgccgccgactccggcggtgggggtcagcgttttggcggataccaac
ggaaaccgtgttcgcgatgtcctcgatttcaacgcggatcccgacttgatcaccggcccc
atcctggccggactgatcggaactccagacccatttagccagttgggtgtcattccgttg
acccacgccttccctggcgtgaccttgtcgaccacaggaagcgataatcaacccatcaat
ttcgaagtccaagctcaacgagaattgagtccattcatatctggaaccaattttttctat
tcgtacgaggggaactttggatggaatgacactcgccggctgcgagtggaattcaataat
ccagttcgcgaagtttcgatcatggcgatcggcgctccattggggaaccagccccactat
ggtcggttgtcagcctacaacgccaacgacgaactaatcggcacggtgcttagcaacgcg
atgcttggcggtaaccgtcaatcgatttctgtctcgtcctcaagcgacaatatcgcctat
gcgattgcctacgctgacaacaccatcgatcccaatgccgctgcgaacggacgctttgat
ggtttcacctatcggcagtctgaaattgcagcggttaccgacgatcagggtggctatgaa
atcaagggactgtacccgggccagtacgacatcgtgatttccaacaatgcctccaattcg
ttgctgggactggatcctcgcagcatcgaggttatcaaatacgaaaatttcgttgtcagt
tcgtcagcccgcttcaatagtgcgccaggcgttgaaccggagtattcgtttaccgtcagc
gaaaccgcccctgtgggaacctccatcggtgtggtcgccgtagacgatcccgatggccaa
ccgttgacggtttcgatcgtgggcgacaacccgagtggtctggtgctggatccaagtacg
ggcgaattgctagtcggtcccaattcggttcttgatttcgaaaccaacaacgtgatcacc
ctgcgtgttcaagtcgacgacggattggtgacggccgaagcgaccgtgattgtgaatttg
accgatgcgaatgaagctcctgtggtgaactctgtcccgtttgtggttaccgagggcaca
ccttcggggaccagtttgggacaggtcaccgcgatcgatttggatgaaggtgcgacgcag
caattgacatacgagattgtcggcgggcctagccagaacgtgttcacgatggatccacag
tccggaacggtcaccctggtggatgctggcgcgatcgatttcgaggtcgctggtgaactt
cgattcacggttcgagtcagcgacaattcggtgccgccgatgtcgaccgaatttgaacag
ttggtctggatcgccgaccagaatgacccacccgcggtcgcgaccacccaaatcaacgtt
cccgaaaacaccgcttcacggttcgtcggtacgctggtcgctaatgatccggatgccaac
cagacgcacaccttcgaactgctcggtggcaccggacgcgacctgttcctggtgcgtccc
aacggaacggtcgaagtgcggcctggcgcagtgatcgatttcgaacagggcagccagtac
acgctgcatgtgcgaaccatcgatagcggagccccaccgttggcaaacgaagcgacggtc
aatgtatcgatcatcgatgtggacgaacttcccgaactagaagttgccacggcgaccctt
tccgaaggtgcggtggccggcgattcggtgatcaccctgtcggcagtggatcctgatggt
ggcaatgtgcaaaccacgatcacaatgctctctgggcgcgatgcaagtaattttcagttc
gatcccaattcgggattattgacggtcgcacccggagcggttctggattttgaaaccatg
ccgattcaaaccgttgattttcaaatcgattccgtcggttccgatgcgtcgaaccaggtc
cgtttgcagattcagttgaccgatgccaatgatgccccgcacatcaccaccaaccaagtc
gtgatctctgaacgggctcaatccggtgcattcgccgggcggattcgtgggatagatcca
gaccgcggcgatacagttaccttcgcgatcaccggtggaaatgcccaagatcgattcgtg
atcgatgcgacgtcgggaatcgtgcgagttgccgaaggtgcgtcctttgacgccgacgtt
gtggcggatccgctttcgatcgaagttcaagttaccgatgacaccggagcgtccagtgtg
cacgtcgtgcgtgtcgtggtcaacgaagtgaacgagccaccgatcttccgctatggaccg
ccggcggtatcaaacgtgatcagtggtgaattcttcgagatgcatatcccgcacgaccaa
gtggtcgatcccgaaggccgcgagttcacgattgcaatcttcgatcaacaggggacattg
ccatcgtggttgacctaccattcggacacgcggacgttgtcggggtacgccacgccacag
acggtggggcagcaaacgttgaccttacgagcgtttgaaccgggaccgttggaactgcga
accgatacgacgttcgacttgattgtctcggccggtcagcaaccgttgaccaacaaacac
gatcgattggacgtggatgcaagtaacgtcgtgtcgccgctggatgcgttgcgagtgatc
aactacatctcacgctatggcagcggtgcatccgtgaacgatccccatccgttcgctggg
ttcgtggatgtgtcgggcgatggcatggtcaccgcctttgacgcgctgttgatcttgaat
gggttgaaacaagaatcatcgtcaccggtttccggcgaacagatcgacgcggtgctggat
gatcgcgacgaaaccaacgatcatgcgatggcagaatacctgttggaatcgtcgttgttc
taa
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