Rubripirellula lacrimiformis: K227x_01810
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Entry
K227x_01810 CDS
T07352
Symbol
sigA_1
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
rlc
Rubripirellula lacrimiformis
Pathway
rlc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K227x_01810 (sigA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rlc03021
]
K227x_01810 (sigA_1)
Transcription machinery [BR:
rlc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K227x_01810 (sigA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
HTH_23
HTH_38
HTH_17
MerR_1
MerR
Sigma70_r4_2
CENP-B_N
HTH_7
Emfourin
KORA
DUF2802
Motif
Other DBs
NCBI-ProteinID:
QDT01813
UniProt:
A0A517N3U7
LinkDB
All DBs
Position
complement(241586..243259)
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AA seq
557 aa
AA seq
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MHEDYRDAKIKELRDQLTRFAPKAKKLEQASLTEKLYGEIEADRSYAFDYLCFRITNYRP
EKASRHSVAEADLKHDLRLLIEDLSDSADVEVGEVAEPVHTVDELSKMFRVSTKTISRWR
DAGLVSRRLLFGGRKRVGFLHSSVERFVASNRDKIRRGERFSQLSEDEKSEMIERARQMV
EGGASLSEVTRQLASQMGRSPETIRYTLKNFDADHQSLAIFPNHRGVLTEDDKRAIFKLY
THGASVPHLCKRFNRARTSIQRILLDMRLDQIAELPLDYIFNEDFDDASREAEYLGPLPE
PATAPRKVRVPTGLPSYLAALYDVALLTREQEYHLFRQMNYYKHKASRLRDSLDSADSNK
TAIMDEINDLYEAAVLVKNKIVQSNLRLVVSIAKRHVASTDDFFGLVSDGNMSLIRAVEK
FDYSRGNKFSTYASWAIMKNFARTIPSEFKHRDRFRTTTEELFVSRQDERVDPYAEETVQ
KTRQRELSKILNRLDEREQKIITARFGLGRGSEPLTLKEVGAEMGVTKERIRQLEARALT
KLREAADEAKIDIELGA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaagactatcgcgacgcaaagatcaaggaacttcgagaccaactgactcgcttt
gccccgaaggcaaagaagttggaacaggcctcgcttactgaaaaactatacggcgagatc
gaagccgatcgttcatacgcatttgattatctctgtttccggatcaccaattatcgcccc
gaaaaggcgagccgccacagcgttgccgaagccgacctgaagcacgatcttcgcttgttg
atcgaagacctcagtgattccgccgacgtcgaagtgggcgaggtcgctgaaccagttcat
accgtggatgaactgagcaagatgtttcgtgtttccaccaagacgatcagccgttggcgt
gacgctggtttggtcagccgtcgattgttgttcggtggacgcaagcgagtcggttttctg
cacagcagtgtggaacgatttgtcgccagcaaccgggacaagattcgtcgtggcgagcgt
ttcagccagctgtccgaggacgaaaaaagcgagatgatcgagcgtgctcgacagatggtc
gaaggcggcgcaagtttgtccgaagtgacccgacagttggcctcccaaatgggccgcagc
cccgaaacgatccgttacaccctgaagaactttgacgccgatcaccagtcgttggcgatt
ttcccgaatcaccgcggcgtactaaccgaagacgacaagcgagcgattttcaagctgtat
acccatggtgcttcggtgccacacttgtgcaaacgtttcaaccgtgcccgcaccagcatc
caacgaattttgctggacatgcggttggatcagatcgccgaactgccactcgattacatc
ttcaacgaagactttgacgatgcatcgcgtgaagccgaataccttggtccgctgcccgag
ccagcgacggcaccgcggaaggttcgcgttcctactggtttgcccagttatctggcagcc
ttgtacgacgtcgcactgctgacacgcgaacaggaataccacttgttccgccagatgaac
tattacaagcacaaagccagtcggttgcgtgatagcctggattcggctgacagcaacaag
acggcgatcatggacgagatcaacgatctgtacgaagccgcagtgttggtgaagaacaag
attgtgcaaagcaacttgcgtttggtggtttcgattgccaagcggcacgtggccagcacg
gatgatttctttgggttggtgtcggacggcaacatgtcgttgatccgagccgtcgagaaa
tttgattactcgcggggcaacaagttcagcacctatgcgtcatgggcgatcatgaaaaac
ttcgctcgcaccattccaagcgaattcaagcatcgcgatcgattccgcacgacgaccgaa
gaattgttcgtgtcgcgtcaggacgaacgggtggatccctatgccgaagaaaccgttcag
aagacgcggcaacgcgaactgtcgaagatcctgaaccgactcgacgaacgcgaacagaag
atcatcaccgctcgcttcggactgggccgcggcagcgaaccgttgacgctaaaagaagtc
ggcgcagaaatgggcgttaccaaggaacgcatccgccaattggaagcccgtgcgttgacg
aagctgcgtgaagcagccgacgaagcgaaaatcgatatcgaattgggcgcctag
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