Rubripirellula lacrimiformis: K227x_03940
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Entry
K227x_03940 CDS
T07352
Symbol
lysA_1
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rlc
Rubripirellula lacrimiformis
Pathway
rlc00300
Lysine biosynthesis
rlc00470
D-Amino acid metabolism
rlc01100
Metabolic pathways
rlc01110
Biosynthesis of secondary metabolites
rlc01120
Microbial metabolism in diverse environments
rlc01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K227x_03940 (lysA_1)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K227x_03940 (lysA_1)
Enzymes [BR:
rlc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
K227x_03940 (lysA_1)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QDT02023
UniProt:
A0A517N4G5
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All DBs
Position
518463..519923
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AA seq
486 aa
AA seq
DB search
MLLSSSTPAAREGIEDWRGHCVGSPPLDARVEPWMSELMDRSHLQELVAQHGSPLNLVST
SPMRSNLGQLNQVAEERNLDFQAFFARKSNKCLAFVDEAKQCGAGIDTASENEVRQCLKR
GMDPIQIICTAAVKSDSLIRLCLEKAICIAVDNHDELRVVADLADDLACKAVVALRLGGF
QHDGQKLQTRFGFDVDHDQQVLCELAELPVIVVGIHFHLDGYDASQRVCGIRESIRWIQR
LRDLGHSPSFIDMGGGFPISYLQSQRQWNDFWQQHQRALLGQRDPVTYRNHPLGRHVSGK
TVVGKPNSYPYYQTPVRQDWLASILDAETDHRTIADQLRESKIQLRCEPGRSLMDGCGMT
VARVEFRKQNANRDWLIGLSMNRTQCRTSSDDFLVDPIVVPMETSETSDPISGYFVGAYC
TESELLSLRRMEFPGGIRRGDLVVFPNTAGYLMHFLESRSHQFPLAKNVVVSDDGEGRFD
LDGIDR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgttgctttctagttcgacacccgcggcccgcgaagggatcgaggattggcgtggtcac
tgtgttggctcgcctccgctagacgcacgtgtggaaccgtggatgtccgagctgatggat
cgatcccatctgcaggagctagtcgcgcaacatggatcaccattgaacttggtatccact
tcaccgatgcgatccaaccttggtcagttgaatcaggttgcagaggaacgcaatcttgat
ttccaggcattctttgcccggaagtccaacaagtgcttggcatttgtcgacgaagcaaag
cagtgtggtgccgggatcgatacggccagcgaaaacgaagttcgccagtgtttgaagcga
gggatggatcccattcagatcatctgcacggcggctgtgaaaagtgattcgctgattcgc
ctttgtttggaaaaggcgatctgtatcgccgtcgacaaccacgatgaattgcgggtggtc
gcggaccttgcagacgatctagcatgcaaagcggtcgttgcgctgcgtctaggtggcttt
cagcacgatggacagaagttgcagacgcgttttgggttcgacgttgatcatgaccaacag
gtgctgtgcgaattggcagaattgcctgtcattgtcgtcggaatccacttccatctggat
ggatatgatgcgagtcagcgagtttgcgggatccgagaatcgatccgctggatccagcgt
cttcgagacttggggcactcgccctctttcatcgacatggggggcggttttccaatcagc
tatctgcagtctcaacgacagtggaatgatttctggcaacaacaccagcgggcactgctt
gggcaacgggacccagtcacctatcgcaatcatcccttggggcgacatgtgtcggggaaa
accgttgtcgggaaacccaacagctatccctactaccaaacgccagtgcgtcaggattgg
ctggcctcgattctagacgcggagaccgaccatcgcacgatcgcggatcaactgcgtgag
tccaagattcagctgcggtgcgagccggggcgcagtttgatggatggctgcggcatgacg
gtggcccgagtcgaatttcgcaaacagaacgccaaccgggattggttgattggcctgtcg
atgaaccgaactcaatgccgcacgtctagcgatgactttttggtcgacccgatcgtcgtg
ccgatggaaacctccgaaacatcggatccgatcagtggctatttcgtaggcgcgtactgt
accgagtccgaactgttgtcgctgcgtcgaatggagttccccggcggcatccggcgaggt
gacctggtggtgtttccgaacaccgccggatatctgatgcactttctagagagccgttcg
catcagttcccattggccaagaacgttgtggtttccgatgacggtgaggggcgattcgac
ctggacggcatcgaccgttga
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