Rubripirellula lacrimiformis: K227x_04040
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Entry
K227x_04040 CDS
T07352
Name
(GenBank) Uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rlc
Rubripirellula lacrimiformis
Pathway
rlc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K227x_04040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlc03400
]
K227x_04040
Enzymes [BR:
rlc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
K227x_04040
DNA repair and recombination proteins [BR:
rlc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K227x_04040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QDT02033
UniProt:
A0A517N4H8
LinkDB
All DBs
Position
complement(529839..531221)
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AA seq
460 aa
AA seq
DB search
MQTIFIDSYDRWRTEARRLITMDVHPSDVQWQSNAEQPSLFDDDLLPQPDCKHGFSVPRK
FLELAKNVACHRSDARWSILYRTLWRILNQHRELLNITTDDDVYQLVQMQKAVTRDVHKM
KAFVRFRKVSDNPESFMAWHRPDHRIVRLAAPFFARRFRGMNWSIFTPDESVAWDQSELQ
YGPGVPASAVSSEDALEELWKTYYASTFNPARVKVAMMKREMPVRHWATLPETDLIPELL
QRAPTRVDQMIETQEGFGQTAAHFMPTERSLESLSDAAGRCTACDLCHDANQLVFGEGPA
NAKIVLIGEQPGDLEDIQGKPFVGPAGQLLDECLAAAGIDRTTVYVTNTVKHFKFTRLDK
RRLHKKPDSREIFACRPWLEAELEEIQPDVIVCLGATPAQALLGRDFRITRSRGKRLQTE
WCKQTVATWHPAAVLRMPDQSRRHQMQEQLVGDLRMAVGE
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcagactattttcattgacagttacgatcgatggcggaccgaagcccgacgtctgatc
accatggacgtgcatccgtcagacgtccagtggcaatcgaatgccgaacaaccaagtttg
ttcgacgatgacttgctgccgcaaccagactgcaaacacggattcagcgttccacgaaaa
ttcttggaattggccaagaatgttgcctgccaccgcagtgatgcccgttggtcgatcctg
tatcgaactctgtggcgaatcctgaaccagcatcgcgagctgttgaacatcaccaccgat
gacgacgtctaccagttggtccagatgcagaaggcggtcacacgagacgtccacaaaatg
aaagctttcgtgcggttccgcaaagtgtctgacaatcccgaatcgttcatggcatggcac
cgtccggatcatcggatcgttcgattagcagccccctttttcgcgagacgtttccgaggc
atgaactggtcgatctttacacccgacgaatcggtggcttgggaccaatccgaattgcag
tacggaccgggcgtgcctgccagtgccgtttctagcgaagacgccctcgaagaattgtgg
aagacgtactacgcgtccacgttcaacccagcccgcgtgaaggtggcgatgatgaaacgt
gaaatgcccgtccggcattgggccacccttcccgaaacggacctgataccggaactactg
cagcgagcaccgacgcgggtcgatcaaatgattgaaacccaagaaggatttggtcagacc
gccgcccacttcatgccgacggaacgcagtctggaaagcttgtccgatgcagccggtcgg
tgcacggcctgtgatctttgccacgatgccaatcaactggtcttcggcgaaggtcccgcc
aatgccaaaatcgttctgattggcgaacagccgggcgacttggaagacatccagggaaag
cctttcgtgggtccggcgggccaactgcttgacgaatgtttggcggcggccggtatcgac
cggaccacggtgtatgtcaccaacacggtcaaacacttcaagttcacaaggcttgacaaa
cggcgtttgcacaagaagcccgattcgcgagagatctttgcatgtcgtccgtggctggaa
gccgagctggaagagatccagcctgatgtgatcgtgtgcctgggtgcaacgcccgcacaa
gcactgctgggacgcgatttccgcatcacccggtcgcgaggaaagcggctgcagaccgaa
tggtgcaaacagacggtcgcaacgtggcacccagcggccgtcttgcgtatgcctgaccag
tcccgacgtcatcaaatgcaggaacaattggtcggcgaccttcgaatggcggtgggggaa
tga
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