KEGG   Rubripirellula lacrimiformis: K227x_08860
Entry
K227x_08860       CDS       T07352                                 
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
  KO
K03698  3'-5' exoribonuclease [EC:3.1.-.-]
Organism
rlc  Rubripirellula lacrimiformis
Brite
KEGG Orthology (KO) [BR:rlc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rlc03019]
    K227x_08860 (yhaM)
Messenger RNA biogenesis [BR:rlc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     K227x_08860 (yhaM)
SSDB
Motif
Pfam: HD tRNA_anti-codon TraI_2 tRNA_anti_2 Cas3_HD
Other DBs
NCBI-ProteinID: QDT02509
UniProt: A0A517N5U0
LinkDB
Position
complement(1169034..1170119)
AA seq 361 aa
MRGLANRQGFGPSFQLIHSLSGVLPLDSLRSAVLPLFESIPVNRIPVSDLTDGQSIEQPF
RAADKQLRVNRQGGKYILMRLSDRTGVIAAMQWNADEKMFDSFDRGDYVFCRGRTQIHNG
TLQLIVTDVERMDVSEVDVAQFERFDADASERLLQRLTELLGGLQNAPLRRLGEIYLADQ
NFVTRFQKAAAAVSNHHAYPGGLLRHTVDMMELCALIAPRYPQIDAELLMFGAFLHDLGK
IEELASDGEIAYTDRGQLVGHIVIGVQMLGDKIAEYDAGGEAFPAELRLHLEHLIVSHHG
QIEYGSPKLPVMLESVTLHHIDNLDAKLSTYTTVIDTDISGDSHWTNYNPSIGRKLWKKR
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgcgaggccttgccaatcgacaaggcttcggaccatcctttcaactgatacattccctt
tcgggcgttttgcccttggattcgctacgctccgccgtcctccctttatttgagtcgatt
cccgtgaaccgcatccccgtttccgacctgaccgacggccaatcgatcgagcaacccttt
cgcgcagccgacaaacaattgcgggtcaatcgccaaggtggcaagtacatcctgatgcgg
ctctcggatcgcaccggcgtgatcgccgccatgcaatggaacgccgatgaaaaaatgttc
gattcgttcgaccgtggcgactacgttttttgccgtggacgaacccagatccacaacggc
acgctgcaactgatcgtcaccgatgtcgaacgtatggatgtgtccgaagtcgacgtcgcc
cagttcgagcgtttcgacgccgacgcttccgaacgtctactgcagcgactgaccgaactg
ctaggcgggctacagaacgctccgctgcgtcgcctgggcgagatctaccttgccgatcaa
aacttcgtcacgcggttccagaaggccgctgctgcggtatccaaccaccatgcctatccc
ggcggactgctacgacacacggtcgacatgatggaactgtgtgcgttgatcgcgccacgg
taccctcaaatcgatgccgaactgctgatgttcggtgcgttcctgcatgaccttggcaaa
atcgaagaattggccagcgacggcgagatcgcctataccgaccgcggccaactggtcgga
cacatcgtcatcggcgtccaaatgctgggcgacaaaatcgcggaatacgatgccgggggc
gaagccttcccagccgaacttcgattgcacctggaacacctgatcgtcagccaccacggc
cagatcgaatacggcagccccaaactgcctgtgatgctggaatccgtcacgctgcatcac
atcgataacctggacgccaaactgtcgacttacaccacggtgatcgacaccgacatttca
ggcgacagccactggaccaactacaacccttcgatcggtcgcaaactgtggaagaaacgc
agctag

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