Rubripirellula lacrimiformis: K227x_09220
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Entry
K227x_09220 CDS
T07352
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rlc
Rubripirellula lacrimiformis
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rlc03016
]
K227x_09220 (truA)
Enzymes [BR:
rlc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
K227x_09220 (truA)
Transfer RNA biogenesis [BR:
rlc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K227x_09220 (truA)
Prokaryotic type
K227x_09220 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QDT02544
UniProt:
A0A517N5Z5
LinkDB
All DBs
Position
complement(1218080..1219018)
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AA seq
312 aa
AA seq
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MASFAAQGYFFSRRIRRLTGTYKLTIAYDGGSFAGWQVQSDRKTVQECLQNAIAKIAGQR
CNVVGSGRTDAGVHAIAQVASVRIPTWSHSPQTLARAINVHLPDTIVVTQAQTAVDGFHA
IRDATGKRYRYQLQVGGPRDVFQYRYRWHLHTAIDVEAMRTAARRMVGEHDFASFQASGS
DRKTTVRDVRACDVIIQDSPGIESPGIDSPEIDDRETPDAQVYGGRPEQPALNLAIEVEA
NGFLYNMVRNIVGTLVAVGRGKYPPEWVADVFAALDRSAAGQTAPAHGLFLLNVDYPSSI
LTDWHPTASHPS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
ttggcgagtttcgcggcgcagggatattttttttcacgcaggatcagacgactgactgga
acctacaaactgacgatcgcctatgacggcggatcttttgcggggtggcaggtccaatca
gatcgcaagaccgttcaagagtgcttgcagaatgcgattgcaaaaatcgcaggccaacga
tgcaacgtcgttggcagcgggcgaaccgacgcaggcgtgcatgcgattgcgcaagtcgcc
agcgtgcggatccccacctggtcgcattccccccaaacactcgctcgtgcgatcaacgtt
catttgcccgataccatcgtggtgacgcaggcccaaaccgctgtcgatggattccacgcg
atccgcgacgccaccggaaaacgctaccgataccaactgcaggtgggcgggccgcgggac
gttttccaataccgatatcgatggcacctgcacacggcgatcgatgtcgaagcgatgcgc
acggcggctcggcggatggtgggcgagcacgactttgccagtttccaggcgtccggatcg
gatcgtaaaacgacggtccgtgatgtccgagcatgtgacgtgatcatccaagattcgccg
gggatcgaatcaccagggatcgactcaccagagatcgatgaccgcgaaacgcccgatgcc
caggtctacggcggtcgccccgagcagcccgcactgaaccttgccatcgaagtcgaagcg
aacggatttctttacaacatggtccgcaatatcgtgggcacgttggtggcggtgggccgc
ggaaagtatccgcccgagtgggtagccgatgtgttcgcggcactggaccgcagcgctgcc
ggccagaccgcgccggcacacgggttgttcctgctgaatgtcgattatccgtcatcgatc
ctgaccgattggcatcccaccgcaagccatccaagctag
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