Rubripirellula lacrimiformis: K227x_16320
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Entry
K227x_16320 CDS
T07352
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
rlc
Rubripirellula lacrimiformis
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rlc03016
]
K227x_16320
Enzymes [BR:
rlc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
K227x_16320
Transfer RNA biogenesis [BR:
rlc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
K227x_16320
Prokaryotic type
K227x_16320
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
QDT03250
UniProt:
A0A517N811
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All DBs
Position
2177273..2178112
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AA seq
279 aa
AA seq
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MVENVPLLSHVHDGLTIEGYSRAAVQTCWRISELKLLFDVGVQPWDFMGTPTLFISHAHL
DHIAALPAYVSRRRMMKMDPPVIYLPDSAVDTAWDMLQTFRKLDRGAMPCELVGLLPGDE
TSISREYIVTALPTRHTIDSVGFVVHQIRHKLKPEFLELSGEQIRNLKMAGTEITTESRI
PVVAYTGDTAPKGLDDNPVFYDAKVLISEMTFVAPEHRKDKIHKHGHMHIDDWRKRADRF
NNELIIAGHLSTRYNDSQVKRFVDKVFPDRMDGRLKLWL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaaaacgttcctcttctttcgcacgtccacgacggtctgaccatcgaaggctat
tctcgcgccgccgttcaaacctgttggcgaatcagcgaactgaaattgttgttcgacgtc
ggcgtccagccctgggatttcatgggcaccccgaccctgttcatctcgcacgcgcacctt
gaccatatcgcggcgctgcctgcctacgtttcccgtcgacgaatgatgaagatggatccg
ccggtgatctatcttcccgattcggcggtcgataccgcttgggacatgttgcagactttc
cgaaaactggaccgtggcgcgatgccatgcgaattggtcggattgttgccaggtgacgaa
acgagcatcagccgcgaatacatcgtcaccgctttgccgacgcggcacacgatcgattcg
gttggatttgtcgtgcaccagattcgccacaaattgaagcccgagttcttggaactgtcg
ggggaacagatccgcaacctgaagatggcggggacagagatcaccacggagtcgcggatc
ccggtcgtcgcatacaccggtgacacggcgcccaagggtctcgacgacaatcccgtgttc
tacgatgccaaggtgctgatcagcgagatgacttttgtcgcgcccgaacatcgcaaggac
aaaatccacaaacacgggcacatgcacatcgacgattggcgaaagcgagcggatcgtttc
aacaatgaactgatcatcgctggccacttgagcacccggtacaacgatagccaagtcaaa
cgtttcgttgacaaagtgttccccgatcgtatggatggccgtctaaagctatggctgtag
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