Rubripirellula lacrimiformis: K227x_16710
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Entry
K227x_16710 CDS
T07352
Symbol
rluC_1
Name
(GenBank) Ribosomal large subunit pseudouridine synthase C
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
rlc
Rubripirellula lacrimiformis
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rlc03016
]
K227x_16710 (rluC_1)
Enzymes [BR:
rlc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
K227x_16710 (rluC_1)
Transfer RNA biogenesis [BR:
rlc03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
K227x_16710 (rluC_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Asp_Glu_race
Motif
Other DBs
NCBI-ProteinID:
QDT03289
UniProt:
A0A517N827
LinkDB
All DBs
Position
complement(2223254..2223928)
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AA seq
224 aa
AA seq
DB search
MTELKIVWDGGHLIAVDKPAGLSTQAPPGCDSLEFRLRAQLAPRTQYLAIVHRLDRPVSG
IVLVALRKKEARLISDQFATRKVTKQYAAIVAGHVVPGQSVWTDHVRKVPDRPLAQICDA
SVDGAKHAETRVQVIAYDQSVDRSLLHLFPHTGRMHQLRIQSSHRGHPIIGDSDYGSVDN
ESAPQPTVPGPLMLRAESIEFHDPANGRRISASVETLPWTDGFG
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgaactgaaaatcgtctgggatggcggccacctgatcgccgtcgacaaacccgcg
ggcctgtcgactcaggcgcctccgggatgcgacagcctggaatttcggttgcgggctcaa
ttggcccctcgcacgcaatatctggcgatcgtgcaccgcttggaccgtccggtcagcggg
atcgtgttggtcgcgttgcggaagaaagaagcccgcctgatctcggaccaattcgcgacc
cggaaagtgaccaagcagtacgccgccatcgtcgccgggcacgtcgtgccggggcaaagc
gtatggaccgatcacgtccgcaaggttcccgatcggccgttggcacagatctgtgacgcg
tcggtcgacggcgccaaacatgccgaaacccgtgtccaggtgattgcctacgaccagtca
gtcgaccgcagcctgctgcatctgttccctcataccgggcgaatgcatcagctgcggatc
caatcgagccaccgcggtcacccgatcatcggcgattcggactatggttcggtggataac
gagtctgcgccccaaccgaccgtcccggggccgttgatgctgagggcggaatcgatcgaa
tttcacgatccagccaacgggcgacggatttccgccagcgtcgagacgttgccttggacc
gatggcttcggttaa
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