Rubripirellula lacrimiformis: K227x_20180
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Entry
K227x_20180 CDS
T07352
Symbol
lcfB_2
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rlc
Rubripirellula lacrimiformis
Pathway
rlc00061
Fatty acid biosynthesis
rlc00071
Fatty acid degradation
rlc01100
Metabolic pathways
rlc01212
Fatty acid metabolism
rlc02024
Quorum sensing
rlc04146
Peroxisome
Module
rlc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K227x_20180 (lcfB_2)
00071 Fatty acid degradation
K227x_20180 (lcfB_2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K227x_20180 (lcfB_2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
K227x_20180 (lcfB_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rlc01004
]
K227x_20180 (lcfB_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rlc04147
]
K227x_20180 (lcfB_2)
Enzymes [BR:
rlc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K227x_20180 (lcfB_2)
Lipid biosynthesis proteins [BR:
rlc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K227x_20180 (lcfB_2)
Exosome [BR:
rlc04147
]
Exosomal proteins
Exosomal proteins of breast milk
K227x_20180 (lcfB_2)
Exosomal proteins of breast cancer cells
K227x_20180 (lcfB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QDT03634
UniProt:
A0A517N925
LinkDB
All DBs
Position
2664311..2666152
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AA seq
613 aa
AA seq
DB search
MGFLFRTGSPGESSPQESSPQESSLGQTSVGIAADRETVDREAADREAADREANKREANE
RASGPRPTGITSYRDLPAYGVLQHAAEQIPTRPAIVYGDLVWNYGRLNYDSIRVAALLQR
MGVRPGDRVGILLPNVPEYVIAANAIWRCAAVAIAISPLMVAEEISALLSRTKCRIVISL
DMLSDVIVDPSIHRLLVSLRQHLPSLYQLGYLWARRTRTGHWTLPTGPRCQWLWQQVDRT
TNRWQPITIDCANDPAYILPTGGTTGTPKAVTLSHTNLVANAWQQYQWTGCSFARETMLA
VLPFFHSYGMSATVMGGAATGATLVLHHRFNTRQTIDLIEKHRPTVFHAVPAMLVAMNER
FRKHRPDIHGLRWVISGGAPLEQEVASEFRDFTGALVVEGYGLSEASPVTHVGHLFRDPR
YGVIGLPLPETECRIVDETDGDTEVSEGQVGELIIRGPQVMIGYWDDDAATAAAIRGGWL
FTGDLAVQETEGYYRIVGRKKDLIITSGFNVYPSEVEDVIRGAPGVLDAAVVGVVDDHRG
ELVKAFVVMKPGAVWDESVLDGHCAMHLSKYKRPRRWQRCQDDLPRNFLGKVLRRNLRES
DVSASVDEIKETM
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgggttttctgttccgcacgggatcgccaggggaaagttcgccgcaggaaagttcgccg
caggaaagttcactaggccaaacttcggtagggatcgcagccgaccgcgaaaccgtcgac
cgtgaagcagccgaccgtgaagcagccgaccgtgaagccaacaagcgcgaagccaacgag
cgggcatcgggcccacgccccaccggcatcacctcgtatcgtgatttgcccgcctacggt
gtcttgcagcacgccgccgaacagatccccacacggccggcaatcgtttacggcgacctg
gtttggaactacggtcggctgaactacgacagcatccgagtcgcggctttgctgcaacgg
atgggagtccgaccgggggaccgggtcggtatcttgctgcccaacgttccagaatacgtc
atcgcggccaacgcgatctggcgctgcgctgcggtggcgatcgccatcagtccgttgatg
gtggccgaagaaatttcggcccttctttcgcggaccaagtgccggatcgtcatctcgctg
gacatgctttcggacgtcatcgtagacccatcgattcatcggttgttggtttcgctgcgc
cagcatctgccgtcgctgtatcaactcgggtacctctgggcacggcgcacacgaaccggc
cactggacgcttccgactggaccgcggtgtcagtggctttggcagcaagtcgatagaacc
accaatcgttggcagccaatcacgatcgactgtgccaacgacccggcgtacattttgccg
acgggaggcaccacggggactcccaaagcggtgacgcttagccacaccaacctggtcgcc
aacgcgtggcaacaataccagtggaccggttgctcgttcgcccgcgaaacgatgctggcg
gtactgccgttcttccatagctacggaatgtccgcgaccgtgatgggcggcgccgcgacg
ggggcgacgttggtgctgcaccatcgattcaacactcgccaaaccatcgatctgatcgaa
aagcatcggcccacggtgttccatgcggtgcccgcgatgttggttgccatgaacgaacgt
tttcgaaagcatcgaccagacatccatggcctgcgatgggtgatttcaggtggtgctcca
ctcgaacaagaagttgcgtcagagtttcgtgattttacgggtgccttggttgtcgaaggt
tacggattaagcgaggcgtctccggtgactcacgttggtcacctgtttcgcgaccctcgc
tacggcgtgatcggattgccattgcccgagaccgaatgtcgaatcgtggacgaaaccgac
ggtgataccgaggtttccgaaggccaggtcggggaactgattatccgcggtccgcaggtg
atgatcggatattgggatgacgacgcggcgactgccgctgcgattcgcggcggatggttg
tttaccggtgatttggcggtccaagaaaccgaagggtattaccggatcgtcggtcgcaaa
aaagacctgatcatcacctcgggattcaatgtgtatcccagcgaggtcgaagacgtgatc
cgcggtgcgcccggtgtgttggatgcggccgtggtcggggtcgtggatgaccatcgcggt
gaactggtgaaggcgtttgtggtgatgaaacctggtgccgtatgggacgaatctgtcttg
gacggacattgtgcgatgcacctatccaaatacaagcgtccgcgacggtggcaacgatgt
caggacgacctgcctcgcaactttcttggcaaagtcctccgtcgcaaccttcgtgaatcc
gatgtttcggcatccgtcgatgaaatcaaggagaccatgtga
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