Rubripirellula lacrimiformis: K227x_27020
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Entry
K227x_27020 CDS
T07352
Symbol
sigA_2
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
rlc
Rubripirellula lacrimiformis
Pathway
rlc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K227x_27020 (sigA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rlc03021
]
K227x_27020 (sigA_2)
Transcription machinery [BR:
rlc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K227x_27020 (sigA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
KORA
DUF6819
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
QDT04312
UniProt:
A0A517NAZ5
LinkDB
All DBs
Position
complement(3556759..3557670)
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AA seq
303 aa
AA seq
DB search
MSQYDTAVNPEDAELKEAVSNTRRRVAPSSRTAQSPLETYLREINETALLSAQEEKELAG
RIAQGDVMARDRMVRANLRLVVNIARGYTGKGLGLQDLIEEGNLGLLRAVEGFDPAVGTR
FSTYASYWIKQSIKRALINSAKTIRIPAYMVELLSKWRRATARLNEELGRTPTNEEVARV
LGLPKKKLPIIRKAIRISNSTPQSDQTDSGWSLGEMVMDERLKAPDEEMLDHDILRHAME
LLGDLEEREATVLKLRFGLGGEEPKTLKEIGAELGLTRERVRQIETEALRRLADGLTDPR
DRF
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatacgatacagccgtcaatcctgaagacgccgaactgaaggaagccgtttcc
aacacccgtcgtcgtgtcgcgcccagttcacggacggcacagtcaccgctagagacttac
cttcgggagatcaacgagaccgcattgttgtcggcccaggaagaaaaagaactggccggc
cggatcgctcaaggcgacgtgatggctcgcgaccgaatggtccgagccaacttgcgattg
gtcgtcaacatcgctcgcggttacaccggcaaaggcctggggcttcaggacctgatcgaa
gagggcaacctgggtctgctgcgagccgtcgaaggtttcgacccagcggtcggcacgcga
ttcagtacctacgcaagttactggatcaaacaatcgatcaagcgtgcactgatcaacagt
gcgaaaacgattcgcatcccggcgtacatggtcgaactgcttagcaagtggcgacgagcg
acggcgcgactgaacgaagaactcggtcgtacgccgaccaacgaagaagttgcacgcgtc
ttggggctgcccaagaaaaagctgccgatcattcgcaaagcaatccgcatcagcaacagc
accccgcaaagcgaccagaccgattccggttggtcgttgggcgaaatggtgatggacgag
cgtctgaaggcgccggacgaagagatgctggatcacgacatcctgcgtcacgcgatggag
ctgcttggcgacctcgaagaacgcgaagccacggtcctgaaactgcgattcggcctgggc
ggcgaagaaccaaaaacgttgaaagaaatcggagccgaattggggctgactcgcgaacgt
gttcgccagatcgaaaccgaagctctgcgtcgcctcgccgacggcctgaccgatccacgc
gatcgattctaa
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