Rubripirellula lacrimiformis: K227x_31150
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Entry
K227x_31150 CDS
T07352
Symbol
pmpB_1
Name
(GenBank) putative outer membrane protein PmpB precursor
Organism
rlc
Rubripirellula lacrimiformis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dockerin_1
Planc_extracel
Motif
Other DBs
NCBI-ProteinID:
QDT04721
UniProt:
A0A517NC92
LinkDB
All DBs
Position
complement(4134525..4142120)
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AA seq
2531 aa
AA seq
DB search
MNKRPSRIARLFANSVVTRESSSTSECTGATSSNPPHGRSKSSMRQRTRRRLHAEGLEAR
RLLAAYVVDTVDDSTAVDGLVSLREAIEAANTNSAVGDAIAGEGAATDTITFAAGLSAMT
ITLGSELSIVDSLDISLGAGENITVDGGGNGRVFSVGTGSTSVSISGITLSGGVADNGGA
ILVAAGESLVLDGVTLTSNEANGDAATEGGGALFNDGGSVTITNSTISGNVASGAAGSGG
GLMNFGGTLMVSNTTIDSNVANRAGGGIESTTDSTNTLTDVTLSNNNAGVSPAVARPGNG
GGMHLSGNAGVTITGGLITNNTAAQEGGGLWNSTATMTIDGTTISGNTASGDAADDGGGA
VFNNGGSVDISNATMQDNAADGVAGSGGAILNLGGTLVVTASEISQNEANRAGGGIEATA
GTINTLTNVTLDDNVAGIVASPGNGGGLHITGAGDATVTGGTVSGNLAANEGGGLWNGSG
TMMVSGGTQLSNNTAGNDDADNGGGAIFNSGGIVNVSGATISGNMAVGTRGSGGGILNVD
GGSLTVSTTTISGNSADGILTGDGGGGILSIDGTVTISDSDILENTADGIAGSGGGILSR
GGQLTITDTVIAGNLANRAGGGIELGSVLATLTDVTLGGTNPADGNSVAFGVPSPGNGGG
LHVSADSAVTIVRGSVQNNTAIEGGGLWNSSTGQMTITGTTITQNIATRGGGIHNDAGSS
TADQLYSLNFTPLNTSGVSGTGNVTVSSPTATTRTIRVVIHATGLEDLSGIPGAIHVAHI
HGQFAGNADRPILEQGDGVFFDGTGGTGNAAPPTASVAPSLGEDDGRTVADGFLDFLEGR
PKYGPVLLNLTSTQMRDAAPNGSNPPAGVPPLTHFLSLAGSSDIDPAALFPNGTDFTLDT
TYTFDLTDPDEARQFANLSPLSLREIVLHGQSIDKAVSDAIDAATMGTAPGGVDLGNGMA
FRVTAPVAVAEVQAVGGRLTITDATISGNEALENGGGILNEAGDVHLVDTDLMGNSSGAD
EPGEGGGAIFSGGTMSIAGGTIDQNTAIVGLGNGGGILNTGTLRVTGTAITANSAARAGG
GIENSGTLELFSTTLGNNVTGINGGGLHVSDNGVVTIADGAVTGNTAGREGGGLWNNSSL
MTVDGTTLSGNTASGDAADDGGGAIFNNGGTLMVRTVTIINNTADGASGSGGGIMNLGGT
LLVDSSSITNNVANRAGGGIESTSGSSTSLTDVTLSANTAGPSGSAAPGSGGGLHVTGAG
SVSITGTTVAGNVAASEGGGLWNGSARMTLSDVIISGNTASGDAFDQGGGGVFNSSGTVR
IDDQTRIEGNVADGAAGSGGGILNDAGGTLIVADSIIRQNIANRAGGGIETGTNSTVVMT
DVTLDQNQAGTAPATAAPGNGGGLHVSGSGDVTIIGGIVSDNQAASEGGGLWNGSGRMIV
DGTTVSQNTASGNAADQGGGGLFNEAGELIVRGNSMIIQNVANGTSGSGGGILNNVGASL
VIQNSEVSSNAASRAGGGIEDNAGSSTTITNSRLTNNTAASSPGNGGALHVTGAGNVSIV
STTVAGNTASNEGGGLWNSAVGIMSVSRSTLSGNEAIDGGGIFGDGAGGSLSVVNTTISD
NTAMGKGGGMSVEGGALTLIGVTVAQNAAAVGGGINYETTSAIISNSILATNTATTNPNG
AGALASGGNNLFGDPTGLIITGSTDPVDVDPLLGPLSDNGGPTLTHALLAGSPALDAGAM
FGLTQDQRGVARPQGPAIDIGAFESSLAAPLNDGDIDANDSAPGSAGDSAADSFNVTFDA
VSNVYVVTVNGNEVQRVAPGTVSVIRITGSSDNDTVTINDGSAASPGTPPQNFEILGFGG
DDTVTINSLNSGNSVSIDGGDGNDTVNVGDAFADTAVAGTVMVSGGSQSGPNRRIRTGGL
VSPNNPYDATSQYVESTPASSATGDTLNVHVRSASTSQKVSVDMVDQTITRSFIRLVSFE
GFETIGLATGEGDDSIEVRTSAAGGNVLTVDGRGGDDVVSVLGTTGNDALLVQSIMTDAT
ARTSTEVGNVEFLFIDGQAGNDVIINDAGGGSVGTSPISVLSGGAGDDILIGGNRTDAIF
GGDGTDAILGGAGDDFLFTDHDPDGQRYSSSGELILTGSGSDRGVGIDGDVVVGQLTTET
TDGGISISIFPQSDFPTASLADVDALIAESFSTLAGLGFDFPLIDGPATDLGEVDFQLLE
GLSLSNRTTVQFALTARQAGTLTVETVVGSDTDGPIRFVLLDDQGRFLAVATPQAGNERL
DIDVTAGQAVRIAIYGGNTDFDLRINNLVSGTMLPIVAGTAGDDVFELMTIGNTANFSVN
GTTYSRQLPAGEQIEFLSSGGEDQLRLSASDGMARVLKQGNSVAAFGDQIAALVRGIPIV
EVLVGDLRPLLQNPLDRFDVTGDGQVTALDALRIINYLDRSGIGPISDVIERIDQSILGF
INGTSDIDVNGDNAITALDALQVINRLGVVGGPGSEQVEFVIDPGQTAIDTLFGSDDDED
DANADGENRLF
NT seq
7596 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcgtccttctcgtatcgcacgtcttttcgcgaactctgtcgtcactcgtgaa
tcatcgagcacttccgaatgcaccggagccacgtccagcaatccaccccacgggcgaagc
aagtccagcatgcggcagcgaactcggcgccgtctgcacgccgaagggttagaggccaga
cggttgttggctgcctatgtcgttgacacggtggatgattcgacggccgtcgacggattg
gtcagtttgcgagaggcgatcgaagcggccaacacgaactcggctgtcggcgacgcgatc
gcgggcgaaggtgcagcgactgatacgatcacctttgcagccggattgtcggcgatgacg
atcacgcttggcagcgaactatccattgtcgattcgctggacatctcgttaggcgccggg
gaaaacatcacggtggatggcggcggcaacggccgagtcttttcggtcggtaccggcagc
accagtgtatcgatcagcggaatcacgttgtccggcggtgtggcggacaacggtggcgcg
atcctggtcgcggctggggaaagcctggtgctggacggtgtgacgctaaccagcaacgag
gccaatggcgacgcggccactgagggcggcggtgcgttgttcaacgatggcggatcggtc
accatcacaaattcgacgatcagcgggaatgtggcatcgggagcagcgggcagcggtggc
gggctgatgaatttcggcggcacgctgatggtttccaacacgacgatcgacagcaacgtc
gccaatcgcgccggtggtgggatcgaatccacgacggactcgaccaacacgctgaccgac
gtgacgctcagcaacaacaacgcgggtgtttccccagcggtcgcacgccccggcaacggt
ggcggcatgcacttgtcgggcaacgccggcgtcaccatcacgggcggattgatcaccaac
aataccgcggcccaagagggcggtggattgtggaacagcacggccacgatgacgatcgat
ggcaccaccatttccggcaacacggccagcggcgatgcagcggacgatggcggtggggcg
gttttcaacaatggcggctcggtcgacatcagcaacgcaacgatgcaagacaacgcggcc
gatggtgtggccggcagtggcggcgcgatcctgaacctgggcggaacgttggtcgtcacg
gcatcggagatcagtcaaaacgaagccaaccgagccggcggcggaatcgaggcgaccgcg
ggcaccatcaacacgctgacgaacgtcaccttggatgacaacgtggcgggaatcgtcgcg
tcaccgggcaacggtggcgggctgcacatcaccggcgcgggcgatgccacggtcaccggc
ggcacggtcagcggcaacctagcggccaacgaaggcggcggtctgtggaacggatcggga
accatgatggtcagcggtggcacccagctgagtaacaatacggcgggcaatgacgacgcc
gacaacggtggcggagccatcttcaatagcggcggcatcgtgaacgtttccggtgccacg
atcagcggcaacatggcggtgggaacccgcggcagcggcggcgggattttgaatgtggac
ggtgggtcgttgaccgtgtccaccacgacgatttcggggaacagcgccgatgggatccta
acgggtgatggcggcggcgggattctaagtatcgacggcaccgtcacgatcagcgattcg
gacatcctagagaacactgccgacggaatcgcgggcagcggcggtgggatcctgtcacgc
ggcggccagttgacgatcaccgacacagtgatcgccggcaacttggccaaccgagcgggc
ggcggtatcgaactgggcagcgtgttggcgacgctgaccgatgtgacgctgggtggcacc
aaccctgccgatggcaactcggtcgcgttcggagtccccagtccgggcaacgggggcggg
ctgcacgtgtccgcggattccgcggttaccatcgtccgcggcagcgttcaaaacaacaca
gccatcgaaggcggcggtctttggaattcgtccaccggccagatgacgatcaccggcacg
acgatcacccagaacatcgcgactcgcggcggtggcatccacaacgacgccgggtcgtcg
acggccgaccagttgtattcgttgaacttcacaccgctgaacacatcgggagtctccgga
accggcaatgtgacggtcagttcaccgaccgcgacgactcgcacgattcgagtcgtcatc
catgccacggggctagaggacctgagcggtattcccggcgcgatccacgtggcgcatatc
cacggacagtttgcgggcaacgccgatcggcccattttggaacaaggcgatggagtcttt
tttgatggcaccggaggcaccggcaacgcggccccgccaacagcatcggtcgcaccatcg
ttgggcgaggatgacggacggacggtggcggacggtttcctggatttcttggaaggtcgc
cccaagtacggtccggtgttgttgaatttgacgtcgactcaaatgcgtgacgcggcgccc
aatggttccaacccgcccgctggcgttccgccgctgacccactttttgtctttagcgggt
tccagcgacatcgatccggccgcgttgtttcccaacggcacggatttcaccctggacacg
acctacacgtttgatttgacggatccggacgaggctcgccagttcgccaatctgtcgccg
ttgtcgctgcgagaaattgtgctgcacggtcaatcgatcgacaaagcggtctccgacgcc
atcgatgcggcaacgatgggaaccgcgccgggtggcgtcgacctgggcaacgggatggcg
ttccgcgtgacggcgccggttgccgtcgcagaagtgcaagccgtcggtgggcgtttgacc
atcaccgacgccacgatttcggggaatgaagccctcgaaaacggcggtggtattctgaac
gaagccggtgacgtgcatctggtcgacaccgatctgatgggaaattcgtccggtgccgat
gaacccggcgaaggcggtggtgcgatcttcagcggcggaaccatgtcgatcgcgggaggc
acgattgaccagaacacagcgatcgtcgggctgggcaacggcggcggcatcctgaacacg
gggacgctgcgtgttaccggaaccgcgatcacggccaacagtgccgcgcgtgcgggtggc
ggcatcgagaactctggaacactggaactgttttcgacgacgcttggcaacaacgtcacc
ggcatcaacggtggtgggttgcacgtcagcgacaacggagtcgtcacgatcgccgatggt
gcggtcaccggcaacacggctggtcgcgagggtggcgggctgtggaacaacagcagtttg
atgaccgtcgacggcaccaccttatcgggaaatacggctagcggcgacgcggccgacgat
ggtggcggcgccatcttcaacaacggcggaacactgatggttcgcacggtcaccatcatc
aacaacacggccgatggtgcgtccggcagcggcggcgggatcatgaacttggggggaacg
ttgttggtggattcgagttcgattaccaacaatgttgccaatcgcgccggcggcggtatc
gaatcgacctctggttcgtccacatcgctgaccgacgtgactctatcggcaaacacggct
ggcccatcgggatcggccgcgcccggcagcggtggcggattgcacgtcaccggtgccgga
tcggtgtccattaccggcacgacggtcgccgggaacgtggcggcgtcggaaggtggtgga
ctgtggaatggcagcgcgcggatgacgctgtcggatgtgatcatttcgggcaacacggcc
agcggtgatgcattcgaccaaggtggtggcggtgtcttcaattcgtcgggaaccgttcgc
atcgatgaccaaactcgcatcgaaggcaacgttgccgatggggccgcaggcagcggcggc
ggaattctgaatgatgccggcggaacgctgatcgttgccgattcgatcattcgccaaaac
atcgccaatcgtgctgggggcggaatcgaaaccggtaccaattcgacggtcgtgatgacc
gatgtgacgttggaccaaaaccaagccggcacggctccggcaaccgccgcaccgggcaac
ggtggtgggttgcatgtttccggaagcggtgacgtgacgatcatcggcgggattgtcagc
gacaatcaggcggcgtccgaaggcggtggtctatggaacggatcgggccgaatgatcgtc
gacgggaccacggtttcgcagaacaccgcgtccggaaacgccgccgatcaaggcggtggc
gggttgttcaacgaagcgggcgaactgatcgtacgcggcaacagcatgatcatccagaat
gtcgccaacggaaccagcggcagtggcgggggcatcctgaacaacgtcggtgctagcttg
gtgattcagaattcggaagtgtcgtccaacgcagcttcgcgagccggcggtggcatcgaa
gacaatgcgggttcgtcaacgacgatcaccaacagccgtttgaccaacaacacggccgcg
tccagtcctggcaacggcggtgcgctgcacgtgacgggcgcgggcaacgtttcgatcgta
tcgaccactgttgcgggcaacacggccagcaacgaaggcggcggcctttggaacagtgct
gtcggaatcatgtcggtatcccggtcgacgctaagcggcaacgaagcgattgacggtggc
ggaatctttggcgacggcgccggtggttcgctgtcggtggtcaacacgacgatttccgac
aacacggcgatgggcaaaggcggcgggatgtcggtcgaaggtggcgcgctgacgttgata
ggcgtcacggtcgcccagaacgcggcggcggtcggtggcggtatcaactatgaaaccacg
tcggcgatcatttccaattcgatcttggcgacaaacacggcgaccaccaacccgaacggt
gcaggagcgctggccagtggcggtaataacctgtttggtgacccaaccggactgatcatc
accggatcgacggatccggtcgacgtcgatccgctgctgggccccctatcggacaacggc
ggccccacgctgacccatgcactgttagccggatcgccagcactggatgccggcgcgatg
ttcggtttgacgcaagaccaacgaggggtggcacggccgcaaggacctgcgatcgacatc
ggtgcattcgaatcatcgcttgcggcaccgctgaacgatggcgacatcgacgccaacgat
tccgcgccgggttccgcaggtgattccgcggccgattcgttcaacgtcaccttcgatgcg
gtatcgaatgtttacgtggtcaccgtcaacggcaacgaggttcagcgagttgccccaggg
acggtgtcggtgattcgcatcaccggttccagcgacaacgacacggtcaccatcaacgac
ggatcggccgcgtcgcctggtaccccgccacagaactttgaaatccttggctttggcggc
gatgacacggtcaccatcaactcgctgaactcgggcaactccgtttccattgacggtggc
gacggcaacgacaccgtcaatgttggcgacgcatttgccgacaccgcggtggccggaacc
gttatggtttccggaggaagccagtcggggcctaaccgacggatacgtactggtggtttg
gtgtcgcccaacaatccgtatgacgcaacgtctcagtacgtcgaatcaacgcccgcatct
tcggccactggcgacacgctgaacgtccatgttcgttcggccagcacaagccagaaggtt
tcggtcgacatggtcgatcaaacgatcactcgatcgttcattcgattggtatcgttcgaa
ggatttgaaacgatcggactggccacgggcgaaggcgacgattcgatcgaggtacgcacc
tcggcagctggcggaaacgtgctgaccgtcgatgggcgtggcggcgacgacgtcgtcagc
gtcctgggcacgacgggcaacgacgcgttgctggtgcaatcgatcatgaccgacgcgacc
gctcgcacttcgaccgaagttggcaatgtcgagttcctgtttatcgacggacaagctggc
aacgacgtcatcatcaatgatgcgggcggcggcagtgtgggcacgtcaccgatctcggtg
ctgtcgggcggcgccggcgatgacatcttgatcggcggcaaccgcaccgatgcgatcttc
ggtggtgatggaaccgatgcgatcctgggcggtgcgggcgacgacttcctgttcaccgac
catgatccggacgggcaaaggtattcgtcatcgggcgaattgattctgaccggatcggga
tccgaccgcggtgtcggcattgacggtgacgtcgtggttggacagttgaccacggagacc
accgacggcggtatttcgatttcgatcttcccacaaagcgactttccgaccgcaagcttg
gcggacgttgacgcgttgattgctgaatcgttcagcacgttggcggggttagggttcgat
ttcccgttgatcgatggtccggcaacggatctgggcgaagtcgatttccaactgctggaa
ggtcttagtttgtcgaatcgcaccacggtgcagttcgcgctgaccgcgcgtcaggccggg
acattgaccgttgaaacagtcgtcggcagtgataccgatggtcccatccgttttgtcttg
ttggatgaccagggacgtttcttggccgttgcaacaccgcaagcgggcaacgaacggctg
gacatcgacgtcaccgctggccaagcggtacggatcgcgatctatggcggcaacaccgac
tttgacctgcgaatcaacaacctggtctctggcacgatgttaccgatcgtggccggaacc
gcaggcgacgacgtgttcgagctgatgacaatcggcaacacagcgaatttttccgtcaac
gggacgacttattcgcgtcagttgcccgccggggaacagatcgagttcctgtccagcggc
ggcgaagaccaactgcgtctatcggcgtccgacgggatggctcgcgtcctgaaacagggc
aattctgtcgcagcgttcggtgatcaaatcgccgcgttggtccgcggcattccgatcgtc
gaagtgttggtcggcgatcttcgaccgctgctgcaaaacccgctggatcgattcgatgta
accggcgatggtcaggtgacggcgttggatgcgttgcggatcatcaactatctggatcgc
agcggtatcggaccgatctcggacgtgatcgagcggattgatcagtcgatcttgggcttc
atcaacggcaccagcgacattgacgtcaacggtgacaacgccatcaccgcgttggatgcg
ctgcaggtgatcaatcgattgggcgttgtcggcgggcccggatccgagcaagtggagttc
gtgatcgatccaggccaaactgcgatcgatacgctgttcggcagcgacgatgacgaggac
gacgcaaacgcagacggcgagaatcggttgttctaa
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integrated database retrieval system
