Rubripirellula lacrimiformis: K227x_36130
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Entry
K227x_36130 CDS
T07352
Name
(GenBank) type I restriction enzyme EcoKI subunit R
KO
K19789
DNA repair protein RadD
Organism
rlc
Rubripirellula lacrimiformis
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlc03400
]
K227x_36130
DNA repair and recombination proteins [BR:
rlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
K227x_36130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_22
SLFN-g3_helicase
AAA_30
zf_UBZ
Zn_ribbon_15
AAA
DZR
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QDT05214
UniProt:
A0A517NDK3
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All DBs
Position
complement(4737207..4738868)
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AA seq
553 aa
AA seq
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MKLRSYQQAAVDAVYDHLRSREDNPVAVLPTGAGKSLVLAKIASDAVRQWNGRVLILAHV
KELLEQNADKVRRLCPDIKVGLYSAGLKKRDTNTPVLVAGIQSIYKRACDLDPFDLIVVD
EAHLISKKGDGMYRQFLADCKVINPHVRVIGLTATPFRLDSGMICSADHFLNEVCYEIGI
KELIRDGYLSPLISKAGVHRADFGGLHIRAGEFVSEEVESLVNDDALVSAACAEIVELTA
DRRAVLIFASSVAHGRRVVEVLQVNHGIECGFVTGETPAGERDELLARFRGDAPTSLLGT
EPLRFLCNVNVLTTGFDAPRVDCVVMLRPTMSPGLLYQCVGRGFRLHPDKENCLVLDFGG
NIERHGPIDQIKPKDKAKRPDQGPPAKECEKCHALVACGYANCPECGHPFPPPEREAHDA
EASEAGVLSGEVTDTEYDVQDIIYRIHRKRDADEDAPRCLRVDYMIGLERWQSEFICIEH
SGYARRKAEAWWSERCLDPCPSNAEEAVDIAGSGLLAATETLSVRSISGQKYDRIIKQTL
GEIPNAALEEAPF
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgatcctatcaacaagccgccgtcgatgcggtctacgatcatctgcgaagc
cgcgaggataatcccgtcgcggttttaccgaccggtgccgggaaatcgctcgttctggcg
aagatcgcgtctgacgctgtccggcaatggaatggtcgcgtattgatcttggctcacgtt
aaagagctactcgaacagaacgccgacaaggttcgccgtctgtgccccgatatcaaggtc
ggtctgtattccgccggactcaagaaacgcgacacgaacacccccgttctcgtcgccggc
attcagagtatctacaaacgagcctgtgaccttgatccgttcgatttgatcgtcgtcgac
gaagcccatctgatttcaaagaagggcgacggcatgtatcggcagttcctggccgactgc
aaggttatcaatccgcacgttcgcgtgatcggattgaccgcgacgccgttccgcctcgat
tccggcatgatctgctcggcggaccatttcctgaatgaagtctgctacgagatcggaatc
aaggaactaatccgtgacggatacctaagtccactcatttccaaagccggcgtgcaccga
gcggatttcggtggtctgcatatccgcgccggcgagttcgtcagcgaagaggtcgaatcg
ctggtcaacgacgacgccctcgtgtccgccgcgtgtgccgagatcgtcgaactgacggcc
gaccgccgggcagtgctgatcttcgcgtcgtccgtcgcacacgggcggcgtgtcgttgaa
gtgttgcaggtaaaccacggtatcgagtgcggtttcgtgactggcgagacaccagctggc
gaacgagacgaattgttggcccgctttcgtggcgatgctccaacttcgctactcggcaca
gaaccgctgcgtttcctctgcaacgtgaatgtcctcaccaccgggttcgacgcaccacga
gtcgattgcgtcgtgatgctgcgtcccacgatgtcgcccggattgctttatcaatgcgtc
ggccgcggctttcgtttgcatcccgacaaggaaaactgcctcgtcctcgactttggcggc
aacatcgaacgccacggaccgatcgaccagatcaagccgaaggacaaagccaagcgtccg
gatcaaggcccaccagcgaaagagtgtgagaagtgccatgcactcgttgcatgtggttat
gccaattgtcccgagtgcggtcatccgtttccgccacccgagcgcgaagcccacgacgcc
gaggctagcgaagccggcgtgttgtctggcgaagtgaccgacaccgagtacgacgtccaa
gacatcatctatcgtatccatcgcaaacgtgacgcggacgaagacgcgccaagatgctta
cgcgtcgactacatgatcggcctcgaacgttggcaaagcgagttcatctgcatcgagcac
tccggctacgcgagacgaaaagctgaagcatggtggagtgagcgctgccttgatccctgc
ccatcgaacgcggaagaagcggttgatattgccggctcggggcttctcgcggcgaccgaa
acactctcggtccgctcaatctcaggccagaaatacgaccgcatcatcaagcagaccctt
ggtgagattccgaacgcggcattggaagaggcacccttttga
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