KEGG   Rubripirellula lacrimiformis: K227x_45910
Entry
K227x_45910       CDS       T07352                                 
Symbol
nrdJ
Name
(GenBank) Vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
rlc  Rubripirellula lacrimiformis
Pathway
rlc00230  Purine metabolism
rlc00240  Pyrimidine metabolism
rlc01100  Metabolic pathways
rlc01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:rlc00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    K227x_45910 (nrdJ)
   00240 Pyrimidine metabolism
    K227x_45910 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rlc03400]
    K227x_45910 (nrdJ)
Enzymes [BR:rlc01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     K227x_45910 (nrdJ)
DNA repair and recombination proteins [BR:rlc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    K227x_45910 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N UBA_6
Other DBs
NCBI-ProteinID: QDT06183
UniProt: A0A517NGI1
LinkDB
Position
6043774..6046842
AA seq 1022 aa
MATVLSARASENLSGDPAIEKVNSEHGVEYAQSRFGTRQRTGSHGLKIDTVFCPDNGQTP
FETTQWELRSAAIKDESGKALFEQTDCEIPAAWTQLATNVVVSKYFYGDPTNEGEREKSV
RQLIHRVTRTITDWGLADGYFDSPEDGDRFYRELTWLCLHQHGAFNSPVWFNVGLHAQYG
VAGAKCNWRWNAEQGCVDQPENSYEYPQGSACFIQSVDDNMEDIMRLACSEAMLFKFGSG
TGTDLSTIRSQRERMSGGGTPSGPLSFMRVYDSIAGVVKSGGKTRRAAKMQSLKVWHPDV
LEFIECKWNEEKKAHALIREGYESNFNGEAYGSVCFQNANLSVRLTDEYMDAVRGGTQFQ
TRWVSDKAKGTPPSYDAKELLNKMAECAWHCGDPGVQYDTTINKWHTCPNSGAINASNPC
SEYMFLDDTACNLASINLMKFVQPDGKFHTERFRAASRLFFIAQEILVDHASYPTEPIAA
NSHRYRPLGLGYSNLGSVVMTSGVAYDSDAARGVCGSLTALLHGEANRTSAELASVVGPF
DGYSNNEKPMLNVMRMHREACDQINDDGPAELKEAAQKLWDDVLEIGEKFGFRNAQATVL
APTGTISFMMDCDTTGIEPDIALVKYKQLAGGGMLKIVNQTVRLGLLKLGYNEEQIEVIL
AYIDTNDTIEGAPELKDEHLSVFDCAFQPANGIRSIRWQAHITMMAAAQPFLSGAISKTV
NMPNDVTPADIANAYFWGWELGLKAIAIYRDGSKQSQPLNTKSEEGKAADAAAKVVTETV
EKIVYKPRRERLPDTRQSVTHKFTIAGHEGYLCVGLYPDGRPGEIFITMAKEGSTIGGIM
DSFGTALSIALQYGVPLEVLVNKFSHTRFEPMGHTSNKDIRIAKSVVDYIARWLGLTFMS
GHDNMPARESTNQGNDVVSTAPINTSSVMEGLREDAGAAVALAERATLLAAFGETPSNGS
ASNGSSNGHAKAEPDADGMGGQGDQFARFQIDAPSCDNCGSITVRNGNCYLCHNCGNSMG
CS
NT seq 3069 nt   +upstreamnt  +downstreamnt
atggccacggttctgtctgcacgcgcctctgaaaatctttctggtgacccggcgatcgaa
aaggtcaactcggaacatggtgttgagtacgctcaatcacgtttcggcactcgccaacgc
accggttcgcacggtctgaagatcgataccgtgttctgcccggataacggccagaccccg
ttcgagaccactcagtgggaactgcgaagcgcagcgatcaaggacgagagcgggaaggct
ctgttcgagcaaaccgactgcgaaatccctgccgcttggactcaattggcaaccaacgtt
gtcgtttccaagtatttctacggcgacccgaccaacgaaggcgagcgtgaaaagagcgtt
cgtcaactgatccaccgcgtcacgcgcacgatcaccgactggggtttggccgacggctat
ttcgattcgcccgaagacggcgatcgtttttaccgcgaactgacctggttgtgcctgcac
cagcacggtgcgttcaacagcccggtatggttcaacgtcgggctgcatgcccagtacggc
gtggcgggagcgaagtgcaattggcgttggaatgccgaacaaggatgcgttgaccagccg
gagaactcgtacgagtacccgcagggatcggcgtgctttatccaaagcgtcgacgacaac
atggaagacatcatgcggctggcttgcagcgaagcgatgttgttcaagttcggcagcgga
accgggactgacctatcgaccatccgatcgcagcgcgaacggatgtcgggcggcggcact
ccatcgggcccattgtcgttcatgcgagtctacgattcgatcgccggcgtggtgaagagc
ggtggcaagactcggcgtgctgccaaaatgcaatcgttgaaagtctggcacccggacgtg
ctggaattcatcgagtgcaaatggaacgaagaaaagaaggctcacgcactgatccgcgaa
ggctatgaatcgaacttcaacggcgaagcctacggcagcgtatgtttccaaaacgccaac
ctgtcggttcgtttgaccgacgaatacatggacgcggttcgcggtggcactcaattccaa
acccgctgggtatcggacaaggccaagggcaccccaccgtcttacgacgccaaggaactg
ctgaacaagatggccgaatgtgcatggcactgcggcgacccgggcgtccagtacgacacg
acgatcaacaagtggcacacgtgtcccaacagcggtgcgatcaacgcatcgaacccatgc
agcgaatacatgttcttggatgacacggcctgtaacttggccagcatcaacctgatgaag
ttcgtccaacccgacggcaagttccacaccgaacggttccgcgcagcatcgcgtctgttc
ttcatcgctcaggaaattttggtggaccacgcgtcctacccgacggaaccgatcgcggcc
aacagccatcgttatcgcccgctgggactgggatattcgaacttgggcagtgtcgtgatg
accagcggcgtggcctacgattcggacgccgcacgcggtgtctgtggttcgttgaccgca
cttctgcatggcgaagccaaccgcaccagcgcggaattggcttcggtggtcggcccattc
gatggctattcgaacaacgaaaagccgatgttgaacgtgatgcgaatgcaccgcgaggca
tgcgaccagatcaacgatgatggcccagcagagttgaaggaagcggcccagaagttgtgg
gacgatgtgctggaaatcggcgaaaagttcggcttccgcaacgctcaagccaccgtgttg
gcaccgaccggcacgatcagtttcatgatggactgcgacaccaccgggatcgaaccagac
atcgcgcttgtgaagtacaagcaattggccggcggcggcatgctgaagatcgtcaaccaa
accgtccgactgggattgttgaaactcggctacaacgaagaacagatcgaagtcatcctg
gcctacattgacaccaacgacacgatcgaaggtgcaccggaactgaaagacgaacacctg
tccgtcttcgattgtgcgtttcagccagccaatggcattcgcagtatccgttggcaagct
cacatcacgatgatggcggctgcccagccgttcttgtcgggtgcgatcagcaagaccgtc
aacatgcccaacgacgtgactcccgccgacatcgccaacgcgtacttctggggttgggaa
ctggggctgaaggcgatcgcgatctaccgcgacggcagcaagcagtcgcagccgctgaac
accaagagcgaagagggcaaagcggccgacgcggctgccaaggtcgtcaccgaaacggtc
gaaaagatcgtctacaagcctcgccgcgaacgattgcccgacacccgtcaaagcgtgacg
cacaagttcacgattgccggtcacgaaggctacctgtgcgtgggtctgtatccggacgga
cgtccgggcgagatcttcatcacgatggcgaaagaaggatcaacgatcggcggcatcatg
gacagcttcggcaccgcactgtcgatcgcgctgcagtatggcgtgccattggaagtgctg
gtcaacaagttcagccacacccgttttgaaccgatgggccacacgtccaacaaggacatt
cggattgccaagagcgtcgtcgattacattgcccgttggttgggcctgactttcatgagc
ggacatgacaacatgccggctcgcgaaagcaccaatcaaggcaacgacgtcgtatcgacc
gccccgatcaacacgtcgtcggtgatggaagggttgcgggaagacgccggagccgcagtg
gccttggccgaaagagccacgctgttggcagcattcggcgaaacgcccagcaatggttca
gccagcaatggcagcagcaacggtcacgccaaagcagaacccgatgccgatggcatggga
ggccagggcgaccaattcgctcgcttccagatcgacgcgccgagctgtgacaattgcggc
agcatcaccgttcgaaacggcaactgctacctctgccacaactgcggcaacagcatgggc
tgcagctaa

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