Rubripirellula lacrimiformis: K227x_47850
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Entry
K227x_47850 CDS
T07352
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rlc
Rubripirellula lacrimiformis
Pathway
rlc03420
Nucleotide excision repair
rlc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K227x_47850 (pcrA_2)
03430 Mismatch repair
K227x_47850 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlc03400
]
K227x_47850 (pcrA_2)
Enzymes [BR:
rlc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K227x_47850 (pcrA_2)
DNA repair and recombination proteins [BR:
rlc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K227x_47850 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
K227x_47850 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QDT06376
UniProt:
A0A517NGW4
LinkDB
All DBs
Position
6296003..6298363
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AA seq
786 aa
AA seq
DB search
MDAIFENLTEAQREAVGHIEGPMLILAGPGSGKTRVVTHRIANMIHQGVPPWQIAALTFT
NKAADEMRHRVDSLAPNQPVWMGTFHRFCAQLLRRYATMVGLAENYSIYDTQDSKQAMKR
AVMAAGVSTTHASPDQIASSISHAKNRLMTPETMQGQILRPLDALAAKVYPVYQQQLLTA
NAVDFDDLLLHIANLLRENPEIRSELDNKYKYILVDEYQDTNLAQYAIVRALSIDQPNLA
VTGDPDQSIYGWRGADLNNILDFEKDYPSVKTARLEKNYRSTPNILRAADQLIRHNRKRK
AKDLFTDHPEGDAVVLRMFQDGYQEADGIADEIVHAIAEEGMKPSDFAIFCRMNALTRSL
EHALRSRSLPYQIVNGVEFYQRREIKDLLAYLHLVNNPNHDVALMRVINTPTRGIGAKTV
ERIRDFADYNGIPMLEAARRAKDIEGLAKRAVTMIGKFIKIYDRLAIKATAPLEDLIRFL
VEETEFEAYLEKTAVEQQDANPMSNVDELITAAVEFDRQHPEDGSLEAFLEQVALVADTD
AIDGETDRVTIMTLHAAKGLEYPRVYIIAVEDDLLPHKRSKENEAQFEEERRLLFVGITR
AKERLQLSCCKRRAVRGDTRPVIPSPFLNELPLDEIRRIESTGNRDWFDEEEDYDQSYPE
SWDLPDEDGSPGGDLDAVSETAPVIAPAGFEIDEVSQLPAEELAEVMKPKKKKNIVVAGL
KTGADLLTSGTTPLMSYREGVLVRHSEHGEGTIIEVTGRGPKRTAKVIFPDGEFSFRLAF
AKLELV
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgatattcgaaaatttgaccgaggctcaacgagaggctgtcggtcatatcgag
ggcccgatgctgattttggctggcccgggatcgggaaaaacacgcgtggtcacccaccgg
atcgccaacatgatccaccagggggttccgccgtggcagatcgcggcgttgacgttcacg
aacaaggcggccgacgaaatgcggcatcgcgttgattcactggcccccaaccaaccggtc
tggatgggcacctttcaccgattctgcgctcaactgctgcgccgctatgccacgatggtc
gggttggccgagaactattcgatctacgacacccaggattcgaaacaggcgatgaagcga
gccgtcatggccgccggcgtgtccaccacacacgcatcgcccgaccagatcgcgtcgtcg
atcagccacgccaagaaccgcttgatgactccggaaacgatgcagggccaaatcctgcgc
ccgctggacgcgcttgcggccaaggtctacccggtctaccaacagcaactgttgaccgcc
aacgcggttgatttcgatgacctgctgctgcacatcgccaatctgctccgcgagaaccca
gagatccgcagcgaactggacaacaagtacaagtacatcctggtcgacgaataccaagac
accaacttggcgcagtacgccatcgttcgtgcgctgtcgatcgatcagcccaacctggcg
gtcaccggcgacccggatcaatccatctacggatggcggggtgccgacctgaacaacatc
ctagatttcgaaaaggattatccgtccgtcaaaacggcccggctagaaaaaaactatcgc
agcacgcccaacatcctgcgtgccgccgatcaattgatccggcacaaccgaaaacgcaaa
gccaaggacctgttcaccgaccatcccgaaggggacgcggtggtgctgcggatgttccaa
gacggctatcaagaagccgacgggatcgcggacgagatcgttcatgcgattgccgaagaa
ggcatgaagccatcggacttcgcaattttctgccgcatgaacgcgttgacccggtcgctg
gaacacgccctgcgcagccggtcgctgccctaccagatcgtcaacggtgtggagttctat
cagcgacgtgagatcaaggatctgttggcctacctgcacctggtcaacaaccccaaccac
gacgtggcgttgatgcgagtgatcaatacaccgacgcgtgggatcggggccaagacggtc
gaacgcatccgggactttgccgactacaacggcatcccgatgctggaagctgcccggcgg
gccaaggacatcgaagggctggccaaacgagccgtcacgatgatcggcaagttcatcaaa
atctatgaccgcttggcgatcaaggcgaccgcgccgctagaagatctgattcgattcctg
gtcgaagaaaccgagttcgaagcctacctggaaaaaacggcggtcgaacagcaagacgcc
aacccgatgtccaacgtcgacgaactgatcacggcggcagtcgagttcgatcgacaacac
cccgaagacggatcgctagaagctttcctggaacaggtggcgttggtggccgataccgat
gcgatcgatggcgaaaccgaccgcgtgacgatcatgacgctgcacgccgccaagggactg
gaatacccgcgagtttacatcatcgccgtcgaagacgatctgttgccccacaaacgatcc
aaggaaaacgaggcgcagttcgaagaagaacgcaggctgctgttcgtcggaatcacgcga
gccaaagagcgtttgcaattgagctgttgcaagcgacgcgccgtgcgtggcgatacgcgt
ccggtgatccccagtccatttttgaacgaacttccgttggacgaaattcggcggatcgaa
agcacgggcaatcgcgactggttcgacgaagaagaggactatgaccagagctatcccgag
tcctgggatttgccagacgaagacggatcgcccggcggtgacctggatgcggtttcggaa
acggcacctgtgatcgcaccggctggtttcgagatcgacgaagtgtcccagcttccagcc
gaggaactcgccgaggtgatgaagccaaaaaagaaaaagaacatcgtggtggcggggctg
aaaacaggcgccgatctgttgaccagcggaaccacgccgctgatgtcgtaccgggaagga
gtgctggtacgacactccgaacacggcgaaggcacgatcatcgaagtcaccggccgcggc
cccaagcggaccgcgaaagtgatcttccccgacggcgaattcagcttccgattggcgttc
gcaaaactggaactggtttag
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