Rubripirellula lacrimiformis: K227x_49710
Help
Entry
K227x_49710 CDS
T07352
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rlc
Rubripirellula lacrimiformis
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rlc03016
]
K227x_49710 (truB)
Enzymes [BR:
rlc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K227x_49710 (truB)
Transfer RNA biogenesis [BR:
rlc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K227x_49710 (truB)
Prokaryotic type
K227x_49710 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Peptidase_M24
Motif
Other DBs
NCBI-ProteinID:
QDT06561
UniProt:
A0A517NHE4
LinkDB
All DBs
Position
6551980..6552834
Genome browser
AA seq
284 aa
AA seq
DB search
MTSRDAVNVVQRRLRGLRTDDGAKVKVGHAGTLDPLAEGVLVMGVGRAVRLVPYVQQQVK
HYRGKFLLGQSSVSGDLEGEVAQHPDLPIPTLDQLQTAATGLIGTITQTPPAHSAIWIDG
VRAHERVRAGEDVDMPSRQVQIDTLQILKYQFPEIELDIQCGSGTYIRTLGMDLARAAGS
VAVMSHLCRHGVGRFVHTKAVSVQRLAEDDLEPLLLPPIMAVAHMPQIEIDEDESVRLGH
GLQIRRTTDDDEAAAINEDGELRAIVNVRDGAWFPKRVFPTQNS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgacatcccgtgacgcggtcaacgtagttcagcggcgattgcgtgggcttcgcacggac
gacggagcgaaggtcaaagtcggccatgcgggaaccttggacccgttggccgaaggcgtt
ttggtgatgggcgttggacgcgccgtccggctggtgccctatgttcaacaacaagtgaaa
cattatcggggcaagtttctgttgggccaatccagcgtttcgggagacctggagggcgaa
gtcgcccaacatcccgacctgccgatccccacgttggaccagctgcaaacggcagccacc
ggcctgatcggcacaatcactcaaacgccgcccgcccattcggccatctggatcgacgga
gtccgggcacacgaacgggttcgagccggcgaagacgtcgacatgccatcgcggcaggtc
caaatcgacacgcttcagatattgaagtaccagttcccagagatcgaactggacattcag
tgcggttcgggaacctacattcgcacgctggggatggacctggcacgcgccgccgggtcc
gtcgccgtcatgtcacacttatgccgccacggcgtcgggcgtttcgtccacaccaaagcg
gtgtcggtccagcgactggccgaagacgatctggaaccgctgctgttgccgcccatcatg
gcggtcgcccatatgccgcaaatcgagatcgacgaagacgagtcggttcgactgggacat
ggtctgcaaattcgccgcaccacggatgacgacgaagctgctgcgatcaacgaagacgga
gaactgcgtgcgatcgtcaacgttcgcgacggagcctggttccccaaacgagtcttcccg
actcagaacagctga
DBGET
integrated database retrieval system
