Rubripirellula lacrimiformis: K227x_51970
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Entry
K227x_51970 CDS
T07352
Symbol
recQ_3
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rlc
Rubripirellula lacrimiformis
Pathway
rlc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K227x_51970 (recQ_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rlc03019
]
K227x_51970 (recQ_3)
03400 DNA repair and recombination proteins [BR:
rlc03400
]
K227x_51970 (recQ_3)
Enzymes [BR:
rlc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K227x_51970 (recQ_3)
Messenger RNA biogenesis [BR:
rlc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K227x_51970 (recQ_3)
DNA repair and recombination proteins [BR:
rlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K227x_51970 (recQ_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
HRDC
Helicase_C
RecQ_Zn_bind
Helicase_Sgs1
zf-CXXC
GARS_N
Motif
Other DBs
NCBI-ProteinID:
QDT06781
UniProt:
A0A517NI20
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All DBs
Position
complement(6853663..6855510)
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AA seq
615 aa
AA seq
DB search
MTAEAEKPKQVHRVLRDVWGYDTFRPLQEESIDCVLGGRDSLTVLPTGGGKSLCFQVPAL
CHDGMAVVVSPLISLMKDQVDSLLACGVSAAFVNSTQSDDEKREVADRIRSGELKLLYVA
PERLLAARTLDFLRQQNISFFAIDEAHCISNWGHDFRPEYRGLRMLKDQFPKASVHAYTA
TASESVRDDIASQLGLRKPEIIVGDFDRPNLTYRMIRADGRLGQVIDVVGRHRGESGVVY
CISRKEVEKTAAALVAGGTSALPYHAGLDDSIRKANQDAFIKDKCDVIVATVAFGMGIDK
SNVRYVVHAGMPKSIEHYQQESGRAGRDGLESECVLFYSGGDVVTWKKIMESEPSSYQAA
VASLDAMFNVCAGTVCRHRSLVQYFGQSHAADNCGACDVCLDEIDLVDDPITLSQKILSC
VIRLRERFGVGHTAKVLCGSGEQRIRELGHDKLSTYGLLTKDGLPAVRMWIDQLVQQEYL
CRSGEYQTLSLTDAGRRLLRRDGDPRLSVATPTRRSGKSRSPSAKSGDTWDGVQRGLFDS
LRELRRQIATERNVPAYVIFGDAALREFARHQPQTLDQFASIKGVGARKLEDFGDAFVEA
IQQYCRELNVGNDAK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggaagcagagaagcccaaacaagtgcaccgcgtgctgcgcgacgtctggggc
tacgacacgtttcggccgctgcaggaggaatcgatcgactgtgttctgggcggtcgcgat
tcgctgacggtgctgccgaccggtggcgggaaatcgctgtgcttccaagtccctgccctg
tgccacgatgggatggcagtggtcgtttcgccattgatttcgctgatgaaggaccaagtc
gattcgctgcttgcgtgcggcgtgtcggccgcgttcgtcaacagcactcaatcggacgac
gaaaaacgcgaggtcgcggaccggattcgcagtggcgaattgaaactcttgtacgtcgcg
cccgagcgtttgctggcggcccggacgctggatttcctgcgtcaacaaaacatttcgttc
tttgccatcgacgaagctcactgcatcagcaattgggggcacgattttaggcccgagtat
cgtgggctgcggatgttgaaggatcagttccccaaggcatcggtccacgcctacacggca
acggcgtccgagtcggtccgcgacgatatcgccagccagttggggctgcggaaaccggag
atcatcgtcggcgacttcgatcggccgaatctgacctaccggatgatccgcgccgacggg
cgactcggccaagtcatcgacgttgtcggtcgccatcgcggcgaatcgggcgtcgtgtat
tgcatcagccgcaaagaggtcgaaaagacggcggcggcattggtcgccggcggtacttcg
gcgctgccctatcacgcgggcctggacgactcgattcgcaaggccaaccaagacgcgttc
atcaaagacaagtgcgacgtcatcgttgcaacggtcgccttcgggatgggcatcgataaa
tcgaatgtccgctatgtcgtgcacgccggcatgccgaagtcgattgaacactatcaacag
gaaagtggtcgagcggggcgcgatggtttggaatcggaatgtgtgctgttctattccggt
ggcgacgtggtgacctggaagaagatcatggagagcgagccgtcgtcgtatcaggcggcg
gtcgcatcgttggacgcaatgttcaatgtttgcgcgggcacggtttgtcgccaccgatcg
ttggtccagtacttcggccaaagccatgcggccgacaactgtggcgcctgtgatgtgtgt
ttggacgagatcgatttggtggacgatccgatcacgctaagccaaaaaatcctgtcctgt
gtgattcggttgcgggagcgatttggggtcgggcataccgccaaagttctatgcggatcg
ggggagcagcgaatccgtgaactcggacatgacaagctcagcacctacggtttgctgacc
aaagacgggttgccggcagtgcggatgtggatcgaccaactggttcaacaggaatacctg
tgtcgcagcggcgaatatcagactctgtcgttgaccgatgccggacgtcggctgctgcgc
cgcgatggggatccccgtttgtcggtggcgacgccgactcggcggtccggtaaatcccga
tctccatcagcaaaatcgggcgacacttgggacggggtccagcgtgggctgttcgattcg
cttcgcgagttgcggcgacagatcgcgaccgagcggaacgtgccggcctacgtgattttt
ggcgacgccgcgctgcgagaatttgccaggcaccaaccacaaacgctggatcagttcgcg
agcatcaagggtgtgggcgcacgaaaactggaagacttcggcgacgcgtttgtcgaagcg
atccagcagtactgccgtgaactgaacgtcggcaacgacgcgaagtaa
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