Rubripirellula lacrimiformis: K227x_54370
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Entry
K227x_54370 CDS
T07352
Symbol
recQ_4
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rlc
Rubripirellula lacrimiformis
Pathway
rlc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K227x_54370 (recQ_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rlc03019
]
K227x_54370 (recQ_4)
03400 DNA repair and recombination proteins [BR:
rlc03400
]
K227x_54370 (recQ_4)
Enzymes [BR:
rlc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K227x_54370 (recQ_4)
Messenger RNA biogenesis [BR:
rlc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K227x_54370 (recQ_4)
DNA repair and recombination proteins [BR:
rlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K227x_54370 (recQ_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
MarR_2
Tautomerase
SKI
Motif
Other DBs
NCBI-ProteinID:
QDT07013
UniProt:
A0A517NIY8
LinkDB
All DBs
Position
7174720..7176681
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AA seq
653 aa
AA seq
DB search
MARPSVLDVGLETVTGDPKQILAQQFGMDRFRDGQLAVIERLLGGKNVAAVFPTGGGKSL
CYQLPALMLPGTTVVVSPLIALMKDQCDALAARGIGAARLDSSLTTEEFRDAMQGIRDGS
IKMLYVAPERFFNERFLASVGTLDVSLFAIDEAHCISQWGHNFRPDYLKLAELAKQLSAK
RVLALTATATPEVLADIRDAFAIEPEDAIRTKFFRPNLQLRSSVVDSETHYSVLLDRIST
RPPGPTLVYVTLQRTAEEVAEQLVADGHPATAYHAGMKPEVRSQIQQDFIQSDSGIVVAT
IAFGMGIDKSNIRYVYHFNPPKSMESYAQEIGRAGRDGQDSVCELLLLPDDRVVLENFTY
GDTPSRHNVGRLIDLIAGQADTFHVSHYKLSSETDIRILVVRTLLTYLELDGYIKATSPR
YDTYKIKPRVTSQKILSHFKGEPREFAAGVLSSLTKGRTWFLLNTVLAARKLGAERQRVV
KAIEHMAEQGWLEVQTSDLVHGYRWVNRLDDPKTLADDLHGRLARRESGEVGRLEGVFDL
ARSESCLADQLSQHFGESLDQPCGRCTACLGEGPQSIPQPPSRPLGSSIQRVIENLVREY
PDRFVTARDRARFLCGLSSPGFIRSRLTRHDSYGVCDRIPFAQVLTQVGGTSD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgaccatcagtattggatgtggggcttgaaacggtgaccggcgacccgaaacag
atcctggctcagcaattcgggatggaccgctttcgcgatggccaattggcggtgatcgag
cggcttctgggcggcaagaacgtcgctgccgtcttcccgaccggcggcggcaaaagcctg
tgctatcaattaccggcactgatgttgcccggcaccacggtggtcgtttcgccactgatc
gcgctgatgaaagatcaatgcgatgcattggccgcacgcggcatcggagcggcccgcctg
gattccagcttgacgaccgaggaatttcgcgacgccatgcaaggcatccgcgacggatcg
atcaaaatgctgtacgtcgcccccgaacggttctttaacgaacggttcctggcatcggtg
gggacgctggatgtgtctctgtttgcaatcgacgaggcgcactgcatcagccaatggggc
cacaatttccggcccgactacctgaaattggcggaactggccaagcagctttcggccaaa
cgtgtcttggcgctcacggccaccgcgacccccgaagtgttggcggacatccgcgacgcg
ttcgcgattgaacccgaagacgcgatccgaaccaagttctttcgccccaacctgcaactg
cgcagcagcgtggtcgattcggaaacgcactacagtgtgctgctagatcggatcagcacc
cgcccgcccggaccgaccctggtttacgtcacgctgcagcggacggccgaagaagtcgcc
gaacaactggtcgccgacggacatccagccaccgcctatcacgccgggatgaagccggaa
gtgcgatcccagatccagcaagattttatccaatccgacagcgggattgtggtcgcgacg
atcgccttcggaatgggcatcgacaagtcgaacattcgctacgtctatcacttcaatccg
cccaaatcgatggaatcctacgcccaggaaatcggccgcgccggacgcgatggccaggat
tccgtttgcgaactgctgctgttgcccgacgaccgcgtggtgctggaaaacttcacctac
ggcgacaccccatcgcgtcacaacgtcggccgactgatcgacctgatcgctggccaagcc
gacacgttccacgtctcgcactacaaactgtcgtccgaaacggacatccgcatcctggtc
gtccggaccttgctgacttacctggaactggatggctacatcaaagccacgtcgccccgc
tacgacacctacaagatcaaaccgcgagtgacttcgcaaaagatcctcagccacttcaaa
ggcgaacctcgcgaatttgccgccggcgtgctctcctcactgaccaagggccggacctgg
ttcctgctcaataccgtcctggccgctcgcaaactcggcgccgaacgacaacgtgtcgtc
aaagccatcgaacacatggcggaacaggggtggctggaggtccagacgtcggatctggtc
cacgggtaccgctgggtcaaccgactggacgatcccaagacgctcgccgatgacctgcac
ggccgtctggcgcggcgcgaaagcggggaagtcgggcgactggaaggcgtcttcgatctg
gcgcgttcggaaagctgcctggctgaccaactgtcccagcattttggcgaatccctcgac
caaccttgcggccgctgcaccgcctgtctgggtgaaggtccgcaatcgatcccccagcca
ccgtcgcggccgctgggatcatccatccagcgagtgatcgagaacctggtccgcgaatac
cccgaccgattcgtcaccgcccgcgaccgagcccgattcctgtgcggactctcctcgccc
ggattcatccgctcacggctgacccgccacgatagctacggggtttgcgatcggatcccg
ttcgcacaggtcctgacccaggtcggcggaaccagcgactaa
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