Rubripirellula lacrimiformis: K227x_55260
Help
Entry
K227x_55260 CDS
T07352
Symbol
gmr_2
Name
(GenBank) Cyclic di-GMP phosphodiesterase Gmr
Organism
rlc
Rubripirellula lacrimiformis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_3
PAS_4
PAS_8
PAS_13
Motif
Other DBs
NCBI-ProteinID:
QDT07101
UniProt:
A0A517NIZ0
LinkDB
All DBs
Position
7302141..7304228
Genome browser
AA seq
695 aa
AA seq
DB search
MSSEDAILPTVKGVRAGMLDQRTNTSTVVPYTSDRQTLNSTTDNTSTTSGYTSPEFSIQC
DQSNTAVLADAERKTTEEIVKQQLTAFRRAVSAAGILAVTDVTGKIIEVNDNFCEVSGYA
REELIGQDHRILQSGQHNVQFLREMYSTIGRGKIWRGEICDRAKDGSLYWMDTTIAPMLN
ESGKPHSYFALRVDISDRKRLEGCLHELAYHDTLTGLANRDAILQSIQASIGRSSQHQSA
LLFLDFDRFKLVNDSLGHDVGDQLLIAIAKRLSTTLDHAVPLANSVIPARLGGDEFVVLL
EGLKRAEDATIVAERLLRVFSKSYKLGNHTVYSSASIGIVTSTQEYTLAREMLRDADLAM
YEAKATGKANYVVFDCALRDKAKARLKIENEIRLAIEREEFSLLYQPIVSLESGRTESVE
ALIRWKNEDGELIEPEEFISIAEETGMIVPIGNWVLREACRQIAQWEETLGPLAPVCVHV
NVSRRQLALPNFASFILETTQHYGVEPGRLHIEVTESMIMHDREASIAILCDLKELGFKI
DIDDFGTGYSSLSCLHAFPIDVLKIDREFVSNLNHGQDFGALLHTIVALADNLNLKVVAE
GIENTNQLTLIQALGCEFGQGYLFSKPLLPEDLEQFLRNDAARPPCHWDVSPIQTFHLSD
SDPTDPPHRQPMSVAASSCGSGSQSLKINRSRSTL
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtgtcatcggaagacgccattttgccaaccgtcaagggcgtccgcgcgggcatgctagat
caaagaacgaatacgagtaccgtcgtgccatacacatccgatcgccaaacgctgaacagc
acgacggataacacatcgacgaccagcggctacacgtcgccagaattttctatccagtgt
gaccaatcgaacaccgcagtccttgcggatgccgaacgaaagaccaccgaagaaatcgtc
aagcagcaattgaccgcttttcgccgcgccgtcagtgcagcggggatcttggcagtcact
gacgtcaccggaaagatcattgaagtcaacgacaacttttgtgaagtgtcggggtacgcc
cgcgaggaactgattggtcaggaccatcgcattctgcaatcgggacaacacaacgtccag
ttccttcgcgaaatgtactcgacgattggacgtggcaagatttggcgaggcgaaatctgc
gatcgcgccaaagatggttcgctgtattggatggacaccaccatcgcgccgatgctgaac
gaatcgggcaaaccgcacagctactttgctcttcgcgttgacatcagcgaccggaaacgg
ttggagggatgtctgcatgaactggcctatcacgacacgcttaccggattggcgaatcgc
gacgccattttacaatcgatccaagcgtccatcggacgcagtagccaacaccagtcagca
ctgctgttcttggatttcgatcgtttcaaactggtcaacgacagcctaggccatgacgtc
ggcgaccaacttctgatcgccatcgcaaaacggttaagcacaaccttggaccatgcggta
ccgcttgcaaacagtgtgattcccgcccgcttgggaggcgacgagtttgtcgtcttgcta
gagggattgaagcgagccgaagatgcgacgatcgtggccgagcggttgctgcgagtgttc
agcaaaagttacaagctggggaaccacacggtttattcctctgccagtatcggcatcgtg
accagcacgcaagagtacacactggcacgcgaaatgttgcgtgatgctgacctcgcgatg
tacgaagccaaagcaacaggaaaagcaaactacgtggtcttcgactgcgccctgcgtgac
aaagccaaagcccggctaaaaatcgaaaacgaaatccgattagcgatcgaacgcgaagag
ttttcgctgttgtaccagcccatcgtttcgctggaatcgggacgaaccgaatcggtcgag
gcactgatccgctggaagaacgaagatggcgaactgatcgaacccgaggaattcatttcg
atcgcagaagaaaccggaatgatcgtcccgatcggcaattgggtgcttcgcgaagcctgt
cgccagatcgcccaatgggaagaaactcttggcccgttggcacccgtatgcgttcatgtc
aacgtatcacgtcgccagttggcattgccgaactttgcatccttcattcttgaaaccact
cagcactacggtgtcgaaccggggcgactccatatcgaagtcaccgaaagcatgatcatg
catgatcgcgaagcgtcgatcgcgatcttgtgcgacctgaaggaacttggattcaaaatc
gatatcgatgactttggaacgggctattcgtccctgtcatgtttgcacgcgttccccatc
gatgtgctgaagatcgaccgcgaattcgtttcgaacctgaatcatggtcaagactttggt
gctctgctgcatacgatcgtcgcattagccgacaaccttaatctgaaggtggtcgccgaa
ggaatcgagaacaccaaccaactgaccctgatccaggcgttgggttgcgagtttggtcag
gggtatctgttttccaagccgctgctgcccgaggatctggaacagttcctgcgcaacgac
gcggcacgcccgccgtgccactgggacgtgtccccaatccaaacgttccatttatccgat
tcagatcccaccgaccctccacaccgccaaccaatgtcggttgccgcaagctcttgcggc
tcaggttcccaaagcctgaaaatcaaccgatcgagatccaccctatga
DBGET
integrated database retrieval system
