Rubripirellula lacrimiformis: K227x_56060
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Entry
K227x_56060 CDS
T07352
Symbol
topB
Name
(GenBank) DNA topoisomerase 3
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
rlc
Rubripirellula lacrimiformis
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rlc03032
]
K227x_56060 (topB)
Enzymes [BR:
rlc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K227x_56060 (topB)
DNA replication proteins [BR:
rlc03032
]
Prokaryotic type
DNA Topoisomerases
K227x_56060 (topB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
QDT07181
UniProt:
A0A517NJ65
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All DBs
Position
complement(7408219..7410747)
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AA seq
842 aa
AA seq
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MVRGKRLDWMALVVLSFGFFFAGGLMRVVLAEKPSVARDLASYLKAQTRRDGYLEGSGYQ
VTWAFGHLVELKEPGDYDPALKRWSLDTLPFVPEKFQLRLRGDAGAKKQFAIIQGLFKKA
DSLICATDAGREGELIFRYIQSLAGATRKPAQRLWLSSLTPSAIAKAFASIRPLSDFDDL
YAAAKCRSQADWVVGLNATRNYTVRHQSSPVSTSGSSKQSDKQSGSRRSGLLWSLGRVQT
PVLAMIVRRDDAIRTFVAEPFWELLTNYRKVQFRSIGDRFDNEAEAEEVRKACAQVPLVI
NKVAGRSETSLPPQLYDLTELQRDMNRRFGISAADTLSAAQSLYEAKWITYPRTDSRYLG
KDMRKEVPKILAQLQSFKPTEVSRLDLKKLPFNARIINDAKITDHHAIIPTGAKPGNLTG
HAQKVYDAVAIRLIAAFYPSCEKQVTTVDATAGKVGFRARGVRVVVPGWTLLYPRKDKKS
DEPQTLPDFQKGESGPHQPVVKSGQTSPPKHFSENTLLGAMDTAGKLVEEAELREALKEK
GLGTPATRAATIETLLRRKYIDRDKKNIVATDLGRYLIAIVQDRNLTSPELTGEWEAKLK
QIERGELSASSFMDEIAEYTHGIIRRSDSLSIDPDVYGDCPQCGQKVIAGKKALGCSAWR
KGCSFVLAPIYRESALTMTNLRELLQFGVIREPITIDGGHPFLLTLAASGKLVEVPLPLG
NEQDNDHPDAKRSKPSKRSLTSTKSSSGQAKVSNGADSGLGPCPLCGHPVIETPKSYGCS
QWKQGCGLTIWKTMSGRKISVTNAKKLIKKGETPIVKGFRSKAGKKFDAKLKLVDGKVQF
DF
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcgggaaacggctagattggatggctctcgttgtgctttcctttggtttcttt
tttgccggtgggttgatgcgtgttgtcttggccgaaaaaccttcggttgctcgtgacttg
gcatcgtatttgaaggcccagacgcgacgcgatgggtacctggaaggcagtggttatcaa
gtcacttgggcgtttggacatctggtcgaactgaaagaaccaggtgactacgatccggcg
ctgaagcgatggtccttggacacactgcccttcgtgcccgaaaagtttcagttgcggttg
cggggtgacgccggcgcgaaaaaacaattcgcaatcatccaagggttgttcaagaaggcc
gattcgctgatctgtgcgacggatgcgggacgcgaaggcgaactgatctttcgctacatt
caatcgttggccggagccacgcggaaacctgcccagcggttgtggctcagttcgctgacg
ccttcggcgatcgccaaagcattcgcttcgatccgcccgctttcagactttgatgacttg
tacgcggccgcgaagtgccgtagccaagcggattgggtggtggggttgaacgcgacccgg
aactataccgttcgtcatcaatcaagtcccgtatcgacttccggttccagcaagcaatct
gacaagcagtccggcagtcgtcggtccggtttgctgtggagcttggggcgtgtgcagact
cctgtgttagcgatgatcgtccggcgtgacgatgcgattcggacgttcgttgctgaaccg
ttttgggagttgttgacgaactaccggaaagtgcagttccgctctatcggcgatcgtttt
gacaacgaagcggaagccgaagaagtgcggaaagcctgtgcccaggttccgttggtcatc
aacaaggttgccggccgatccgaaacgtcgctgccgccgcagctctacgatctgaccgaa
ctgcaacgagacatgaaccggcgtttcggaatctccgcggccgacaccctgtcggcggct
cagtcgctttacgaagcgaaatggatcacctatccgcggacggattcacgctacctgggc
aaggacatgcggaaagaggtccccaagattctcgctcagcttcaatcgttcaagccgact
gaagttagcaggcttgatctgaagaagctgcccttcaatgcccggatcatcaacgacgcc
aagatcactgatcaccacgcgatcattccgacaggtgcgaagccggggaacttgaccggg
catgcgcaaaaggtctacgacgcagtggcgatccgattgatcgcggcgttctatccctca
tgcgaaaagcaagtcacgaccgttgacgccacggccgggaaagtcgggttccgtgcccga
ggtgttcgtgtggtggttccaggttggacgctgctgtatccacggaaagacaagaaatcg
gatgaacctcagacgcttcccgatttccaaaagggggaatcgggaccgcatcagcccgtt
gtcaaatccgggcaaacttcgccgccgaaacacttctcggaaaacacgttgctaggtgcg
atggatacagcaggcaaattggtcgaggaagccgaactacgggaagcactgaaagaaaaa
ggtttgggaacacccgctacccgcgccgccacgatcgaaaccttgctgcgccgaaagtac
atcgatcgcgataagaaaaacattgtggcgacagacctgggacgctatctgatcgcgatc
gttcaagaccgcaacttgaccagtcccgagctgaccggcgaatgggaagccaagttgaag
caaattgaacgcggagaattgtcggccagttcgttcatggacgagattgccgagtatacc
cacggcatcatccgccgcagcgattcattgtcgatcgatccggatgtctatggtgactgt
ccgcaatgtggccagaaggtcatcgccggcaaaaaggcgctgggttgttcggcgtggcga
aagggatgctcgttcgttttggccccgatctatcgcgagtccgctctgacgatgacgaac
ctgcgcgagttgctgcagttcggtgtgattcgcgaaccgatcacgatcgatggagggcat
ccgtttctactgacgttggccgcgtcaggcaaattggtggaggtgcccctgccgttgggc
aacgagcaagacaacgaccacccggacgccaagcggtcgaagccatcgaagcggtctttg
acgtcaaccaagtcgtcgtccgggcaagccaaagtatccaatggtgccgatagtggcctc
ggcccgtgcccgctttgcggccaccccgtgatcgaaacgcccaagtcctacggatgcagt
caatggaaacagggatgtggattgaccatctggaaaacgatgtccggtagaaaaatctcg
gtcaccaatgcgaagaagttgatcaagaagggcgaaacgccgatcgtgaaaggttttcga
tccaaggcgggcaagaagttcgacgcgaaattgaagctggtcgacggtaaagttcagttt
gacttttag
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