Rubripirellula lacrimiformis: K227x_56220
Help
Entry
K227x_56220 CDS
T07352
Symbol
recQ_5
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rlc
Rubripirellula lacrimiformis
Pathway
rlc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K227x_56220 (recQ_5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rlc03019
]
K227x_56220 (recQ_5)
03400 DNA repair and recombination proteins [BR:
rlc03400
]
K227x_56220 (recQ_5)
Enzymes [BR:
rlc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K227x_56220 (recQ_5)
Messenger RNA biogenesis [BR:
rlc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K227x_56220 (recQ_5)
DNA repair and recombination proteins [BR:
rlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K227x_56220 (recQ_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Pribosyltran
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QDT07197
UniProt:
A0A517NJ85
LinkDB
All DBs
Position
7429574..7431511
Genome browser
AA seq
645 aa
AA seq
DB search
MVYFVATRLLRDKGAGCTLLVSPLLSLMRNQQAAASALNLQAVSMNSSNRDEWDDIQQRL
QNDEIDVLLVSPERLGNEDFRQNVLPLLANNVGLFVVDEAHCISDWGHDFRPDYRRIVRI
VEALPSNVPVLATTATANNRVVADIQLQIGDAKVQRGPLVRESLRLQNISMPSPAARFAW
LAEKIPEFEGSGIVYTLTQRDAERVTEWLQICGINALSYHAGVEDREAREQALLANEVKV
LVATVALGMGFDKPDIGFVVHFQRPSSVVHYYQQVGRAGRAVENALGILLHGSEDDDIAD
FFIRNAFPPQAHVDQIIQALSESDGGHSIPKLQASLNIANGQIASAIKYLSVESPSPIAK
IGSSWNVTASAAKYQVDSEMVTAITKIRRDEQAEMQRYVDSGECLMHFLSNSLDDPNAAA
CGQCENCVGQPLIDVDYDESLAVRAVHFLRRSFQELAPRKAWPAHSPLPTYGFSGKIGDD
VRASEGRALCLWRDAGWGEQVARDKYDTKRFDDLLVDACASMIEQWSPEPYPSWVTCVPS
LNNPTTVPDFAGRLAAKLGLPFVNCVQKVRATPPQKEMQNSFQQASNLDGAFQVSDENFP
NGACLLVDDIVDSRWTFTIIAALLRERGCEAVFPMALALSSPRMD
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggtctatttcgtggcaacacgtttgctgcgagacaaaggggccggttgtaccctgctt
gtttcacctctgctctcgctgatgagaaatcagcaagccgcggcgagtgcgttgaacttg
caagctgtgtcgatgaactcctctaatcgggatgagtgggacgatatccagcaacggttg
cagaacgacgagattgatgtcctgctcgtttcgccggaacggttagggaacgaggatttc
cgccagaacgtgttgccgctgcttgcgaacaacgtcggactgtttgttgtcgacgaagca
cactgcatatcggactggggccacgacttccggccggactaccgacgaatcgttaggatc
gtcgaagcacttcccagcaatgttcctgttctcgcaacgacggccacggccaataacaga
gtcgtcgcggatatccaactacagattggcgacgcaaaagtacagcgaggccctctcgtc
cgcgaaagtctacggctccagaatatttcaatgccaagccctgctgcgaggttcgcttgg
cttgccgagaaaatccctgagtttgaagggagcggcatcgtctacacgcttacccagcgt
gatgcggagagagtcactgagtggctccaaatctgcggcatcaacgcgctgtcatatcac
gctggcgtcgaggatcgcgaggcacgggaacaggcactgcttgcgaacgaggtcaaggtg
cttgtcgcgactgttgctttggggatggggtttgacaaaccggacattggattcgtagtt
catttccagcggccaagttcggttgttcactactaccagcaagtcggacgtgctgggcgt
gctgttgaaaacgctctgggcatcctgctccatggttcggaagatgacgacatcgcagac
ttcttcatacgcaacgcatttcccccgcaggcacacgttgaccagatcattcaggcactt
agcgaaagcgacggtggccactcgattccaaagctacaggcgtctctgaatatcgcgaac
ggccagatagcgagcgcgatcaagtacctctccgtggagtcgccctctccaatcgcaaag
atcggttcaagctggaacgtgaccgcgtccgcagccaaataccaagtcgattctgagatg
gtcaccgcaatcaccaagatacgacgggacgaacaagcggagatgcagcggtatgtggac
agcggcgagtgtctgatgcactttctgagcaattcgctcgacgacccaaatgctgccgcg
tgcggtcagtgcgagaactgtgtagggcagccactcatcgacgttgactacgatgagtct
ctcgcagtcagagcagtccacttcctgcgtcgtagctttcaagaactcgcaccaaggaag
gcttggccagctcacagtccgctgcctacctacggattttctgggaaaatcggtgatgat
gtgcgggcatctgaaggaagggcgctctgtctgtggagagatgcgggttggggggaacaa
gttgctcgcgacaagtatgatacgaaacgttttgacgatttgctggttgacgcgtgtgcg
tcaatgatcgaacaatggagtccggagccgtaccccagttgggttacttgcgtgccctcg
ttgaacaatccaacaaccgtaccggatttcgcgggtcgtttagctgctaaactgggatta
ccgtttgtcaactgtgttcagaaggttcgtgcgacgccaccacagaaagagatgcaaaac
agtttccagcaagcgagcaacttggacggcgcgtttcaagtttcagatgaaaattttcca
aacggagcatgcctgttggtcgatgacattgttgattcaagatggacttttaccattatc
gctgcgctacttcgggagcgtggctgtgaagccgtgttcccgatggcgttagcactcagc
tcaccacgaatggactga
DBGET
integrated database retrieval system
