Rubripirellula lacrimiformis: K227x_60380
Help
Entry
K227x_60380 CDS
T07352
Symbol
phr_3
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rlc
Rubripirellula lacrimiformis
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rlc03400
]
K227x_60380 (phr_3)
Enzymes [BR:
rlc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
K227x_60380 (phr_3)
DNA repair and recombination proteins [BR:
rlc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
K227x_60380 (phr_3)
Prokaryotic type
K227x_60380 (phr_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
AvrD
Motif
Other DBs
NCBI-ProteinID:
QDT07610
UniProt:
A0A517NKF7
LinkDB
All DBs
Position
7984428..7985894
Genome browser
AA seq
488 aa
AA seq
DB search
MPVPSIRRSNANEHPIREDGDYVLYWMIAFRRTRYNFSLQHAVDLAKQYRKPLVIFEPLR
TRYRWASDRLHQFVIEGMRDNAAMLSSKPVTYYPYVEPRPGVGTPLLHRLAARAVTVVTD
EYPCFFLPHMITAVKDRLPARLELVDSNGVMPLRQPERTFTVAHSYRRWMQKNILDALCE
MPDEDPLKGSRLPRLDRLPTSITKRWPAADIDDLLNGGLASIPIDHDVLPSPTVRGGAKD
AAKRLSRFMDHTIDSYSDDRNHPDEHATTGLSPHLHFGHLSAHELVSRIFEHQDWSPDKL
SPPNGKNHGFWNVDESSEALLDQVLTWREMGFNLSFREPDQYDKFESLPDWAKKSHQQTM
SDPRPETYTAEQLEAAQTGDELWNAAQREIVETGVMHNYMRMLWGKKILQWSPTPQQALR
IMIDLNNKYGLDGRDPNSYSGIFWVLGRYDRAWGPKRPIFGSVRYMTSDSARRKLRLKRY
LQRHTDSN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcccttcgattcgtcgcagcaatgccaacgaacatccgattcgcgaagatggc
gactatgtcctgtattggatgatcgcatttcgccgcactcggtacaatttctccctgcag
cacgccgtcgatctggccaaacagtaccgcaagccgttggtcattttcgaaccactgcgg
acccgttatcgctgggccagcgaccgattgcaccagtttgtgatcgaaggcatgcgtgac
aacgcggcgatgctctctagcaaaccggtcacctactatccgtacgtcgaaccccggccc
ggtgtcggcacaccgctgctgcatcgtttggcggcccgcgccgtcacggtcgtcaccgat
gaatacccgtgttttttcctgccgcacatgatcacggcggtcaaggatcgactaccggct
cgcctggaactggtcgacagcaacggggtgatgccacttcgccaacccgagcggaccttc
acggttgcccatagctatcgccgctggatgcagaaaaacatcctggacgcgctgtgtgaa
atgccggacgaagatccgctgaaagggtctcgcctgccgcggctggaccgcttgccaacg
tcgatcaccaagcgctggccggcggccgacatcgacgatttgttgaacgggggattggcg
tcgatccccatcgaccacgacgtcctgcccagcccgacggtccggggcggtgccaaagac
gcggccaagcgacttagccggttcatggatcacaccatcgattcctatagcgatgaccgc
aatcatcccgacgaacacgcaaccacggggctgagcccgcacctgcatttcggtcacctt
tcggctcacgaattggtcagccgaatcttcgaacaccaagactggtcgccggacaaactc
tcgcctcccaacggcaagaaccacggcttttggaacgttgacgagtcgtccgaagcgctg
ctggatcaagtgctgacatggcgagaaatggggttcaacctcagtttccgcgaacccgac
cagtacgacaaattcgagtcgctgccagattgggccaaaaaatcgcaccagcaaacgatg
tccgacccgcggccagaaacctacaccgccgaacaactagaagccgcccagacgggtgat
gaactgtggaacgccgcccaacgagagatcgtggagaccggcgtgatgcacaattacatg
cggatgctgtggggcaaaaagatcctgcagtggagtcccacgccccagcaggcgctgcgg
atcatgatcgatctgaacaacaaatatgggctggatggtcgggatccaaattcttatagc
ggaattttttgggtattagggcggtatgaccgagcttggggcccaaaacggccgattttt
ggcagtgtccggtacatgaccagcgatagtgcgaggcgaaaactgcgcctaaaacgttac
ctacaacgccacaccgactcaaattag
DBGET
integrated database retrieval system
