Rubripirellula lacrimiformis: K227x_63830
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Entry
K227x_63830 CDS
T07352
Symbol
cnrH_5
Name
(GenBank) RNA polymerase sigma factor CnrH
KO
K24073
RNA polymerase sigma factor CnrH
Organism
rlc
Rubripirellula lacrimiformis
Brite
KEGG Orthology (KO) [BR:
rlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rlc03021
]
K227x_63830 (cnrH_5)
Transcription machinery [BR:
rlc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K227x_63830 (cnrH_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
KORA
HTH_23
Sigma70_ECF
Sigma70_r4
HTH_29
HTH_22
HTH_16
HTH_17
GerE
Motif
Other DBs
NCBI-ProteinID:
QDT07954
UniProt:
A0A517NLE2
LinkDB
All DBs
Position
8414594..8415181
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AA seq
195 aa
AA seq
DB search
MIEPSTPHSLLLAACDGQPQAWNRFVHLYGPLIYRWVRRSGMQSSDAADVTQDVLMSVSR
DLVRFDPKRTDTKFRSWLWTITRRRMADRCRNAPAEQVMGSAAANLVSPIDSADPPTDAR
LDQHTVLTRAVAIYRDRFDPKTWEAFWGTVVDGRSPDEVAESLGVTRWTVYKARARILQR
LRTELAGLIDQDSSG
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaccgtcaacgcctcattcgttgctattggccgcatgcgatgggcaaccgcag
gcctggaaccggttcgtgcatctgtatggtccactgatctatcggtgggttcgtcgcagc
ggaatgcaaagcagtgacgcggccgatgtgacccaagacgtgctgatgtccgtgtcacga
gatctggtgcgtttcgatcccaagcgaaccgataccaagtttcgtagctggctgtggacg
atcactcgccgccgcatggccgatcggtgccgcaatgcaccggccgaacaagtcatgggg
tcagcggccgccaacctagtatccccgatcgacagcgccgatccgcccaccgacgcacgc
ctggaccaacacaccgtgctgacgcgtgcggttgccatctaccgcgaccggttcgacccc
aaaacttgggaagcattctgggggaccgtggtggatggacgtagtcccgatgaagtcgcc
gaatcattgggggtcacgcgttggacggtgtacaaggcgcgcgcccgtatcctgcagcgg
ctgcgcaccgaactggccggcctgatcgaccaggattcatcaggctaa
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