Rhizobium johnstonii: RL0005
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Entry
RL0005 CDS
T00402
Name
(GenBank) putative DNA polymerase subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rle
Rhizobium johnstonii
Pathway
rle03030
DNA replication
rle03430
Mismatch repair
rle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RL0005
03430 Mismatch repair
RL0005
03440 Homologous recombination
RL0005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rle03032
]
RL0005
03400 DNA repair and recombination proteins [BR:
rle03400
]
RL0005
Enzymes [BR:
rle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RL0005
DNA replication proteins [BR:
rle03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RL0005
DNA repair and recombination proteins [BR:
rle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RL0005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
CAK05493
UniProt:
Q1MNF2
LinkDB
All DBs
Position
3382..4104
Genome browser
AA seq
240 aa
AA seq
DB search
MREIIFDTETTGLDNRADRIIEIGGIELFNHFPTGNTIHIFINPGDQKVHPDALAVHGIT
DEFLKDKQPFAEVAEQILTFFGDAKWIAHNATFDMGFINAEFARIGLPPILPERVLDTLS
MARRKHPMGPNSLDALCRRYGIDNSHRTKHGALLDSELLAEVYIEMIGGRQAALGLGMVG
KSNQAARGEMGMEDDVVIAALLERPRPLAPRLSQTEEQAHEALVAKLGEKSVWAKYANLD
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcatcttcgatacggaaacaaccggcctcgacaaccgcgccgaccgcatc
atcgaaatcggcggcatcgagctcttcaatcatttccccacgggcaacacgatccatatc
ttcatcaatcctggagatcagaaggttcatccggatgcgctcgccgtgcacggcattacc
gatgaattcctgaaggacaagcagcctttcgccgaggttgccgaacaaatccttaccttc
ttcggcgatgcgaagtggattgcccataacgccaccttcgatatgggcttcatcaacgcg
gaattcgcgcggatcggtttaccgccaatcctgccggaacgggtgctcgatacgctgtcg
atggcgcggcgcaaacatccgatggggccgaattcgctcgatgcgctttgccggcgctac
ggcatcgataattcgcaccgcaccaaacacggcgcgctgctcgactccgaactgcttgcc
gaagtctatatcgagatgatcggcggcagacaggcggccctcggtctcggcatggtcggc
aaatccaaccaggcagctcgcggtgagatggggatggaagacgacgtggtgattgctgcc
ctgctcgagcggccccggccgctcgccccgcgcctcagccaaaccgaggagcaggcgcat
gaggcgctcgtcgccaagctcggtgaaaaaagcgtctgggcgaaatacgccaacctcgat
taa
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integrated database retrieval system
