Rhizobium johnstonii: RL0123
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Entry
RL0123 CDS
T00402
Symbol
truB
Name
(GenBank) putative tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) (Psi55 synthase) (Pseudouridylate synthase) (Uracil hydrolyase)
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rle
Rhizobium johnstonii
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rle03016
]
RL0123 (truB)
Enzymes [BR:
rle01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RL0123 (truB)
Transfer RNA biogenesis [BR:
rle03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RL0123 (truB)
Prokaryotic type
RL0123 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
CAK05611
UniProt:
Q1MN41
LinkDB
All DBs
Position
complement(151863..152795)
Genome browser
AA seq
310 aa
AA seq
DB search
MSKPRKPKGRPISGWLILDKPVDFGSTEAVSKIKWLYKAEKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVSWGEERATDDLEGDVTKSSDKRPSEQQIRDILPGYIGTI
SQVPPQFSAIKIAGERAYDLAREGETIEIPSREVDIFRLTLLACPDADSAHFEVECGKGT
YVRALARDFGRELGCYGHVSGLRRTFVAPFAEGAMVPLADLVALEAIEDMDERLAALDAL
LIDTCEALSSLPHLVINDDQAHRLKMGNPILVRGRDAPVAESEAYATARGKLIAIGEIGQ
GEFRPKRVFA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccacgcaaacccaagggccggccgatttccggctggttaatcctcgacaag
ccggtggatttcggctcgacggaagccgtttccaagatcaagtggctctataaggctgag
aaggccggtcatgctggcacgctcgatccgctcgcctccggcatgctgccgatcgcgctc
ggcgacgcgacaaagaccgttccctatgtgatggacggccgcaagatctatgaattcacg
gtgagctggggcgaggagcgggcgaccgacgacctcgagggcgacgtgaccaagagttcg
gacaaacgtccgagcgaacagcagattcgcgatatcctgcctggatatatcggcactatc
agccaggtgccgccgcagttttccgctataaagatcgcaggtgaacgcgcctatgatctg
gcgcgcgaaggtgaaaccatcgaaatcccctcgcgtgaggtcgatattttccggctgacc
ttgctcgcctgcccggacgccgacagcgcgcatttcgaagtggaatgcggcaagggtacc
tatgtcagggcgctggcacgcgatttcggccgcgaactcggctgctacggccacgtgtcg
gggctgcggcgcaccttcgtcgcgccttttgcggaaggggccatggtgccgctcgcggat
ctcgtggcactggaggcgatcgaggatatggacgagcgcctggcggccctcgacgcgctg
ctgatcgacacctgcgaagcgctatcctccctgccccatctcgtcatcaacgacgaccag
gcgcaccggttgaagatgggcaacccgatcctggtgcgtggccgcgatgcgccggttgcc
gaaagcgaagcctatgcgacggcccgcggcaagctgatcgcgatcggcgagatcggccag
ggcgagttccgcccgaagcgggttttcgcctga
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