Rhizobium johnstonii: RL0140
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Entry
RL0140 CDS
T00402
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) (CMP-KDO synthetase) (CMP-2-keto-3-deoxyoctulosonic acid synthetase) (CKS).
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00541
Biosynthesis of various nucleotide sugars
rle01100
Metabolic pathways
rle01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RL0140 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rle01005
]
RL0140 (kdsB)
Enzymes [BR:
rle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
RL0140 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
rle01005
]
Lipid A
RL0140 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
Motif
Other DBs
NCBI-ProteinID:
CAK05629
UniProt:
Q1MN23
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All DBs
Position
complement(170519..171274)
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AA seq
251 aa
AA seq
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MSDSNLDGVLVLIPARMASTRLPGKPLADICGLPMIVQVAMRAREAAIGRVVVAVDETRV
FDAVAAAGFEVVMTRVDHQSGSDRIFEALTKVDPEGKAKIIVNIQGDLPTIDPETVRAAL
RPLENEAVDIGTLTTEIDNEEDKTAPHIVKIIGSPISGNRLHALYFTRATAPYGQGPLYH
HIGLYAYRRAALERFVSLGPSTLEKRESLEQLRALEAGMRIDAEVVDTVPLGVDTPADLE
KARRILSAKSN
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattcaaatttagacggcgtgctcgtattgatcccggcgcgcatggcctccacc
cggcttccgggcaagccgctggccgatatttgcggtctgccgatgatcgtgcaggtggcg
atgcgtgccagggaggcagccatcggccgtgtcgtcgtcgccgtcgacgaaacaagagtg
ttcgatgccgtggccgccgccggcttcgaagtcgtcatgacccgcgtggaccaccaatcg
ggttccgatcgaatcttcgaggcgctgacgaaagtcgatccggagggaaaggcgaaaatc
atcgtcaacatccagggcgatctgccgacgatcgatcccgagacggtgcgcgcggccttg
cgcccgctcgagaacgaggcggtcgatatcggcacgctgacgaccgaaatcgacaatgag
gaggacaagacggcgccgcacatcgtcaagatcatcggctcgccgatttccggcaaccgg
ctgcacgcgctctatttcacgcgcgcaaccgcaccttacggccaggggccactctaccat
catatcggcctttatgcctatcggcgcgcggcgctcgaacggttcgtctcgctcggcccc
tcgacgctcgaaaagcgcgaatcgctggagcagctgcgggcgctggaagccggcatgcgc
atcgacgccgaggtcgttgacacggttccgctcggtgtcgatactcccgccgacctcgaa
aaagcgcggcgcatcctctccgcaaagtcgaactga
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