Rhizobium johnstonii: RL0308
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Entry
RL0308 CDS
T00402
Name
(GenBank) putative transcriptional regulator
Organism
rle
Rhizobium johnstonii
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trans_reg_C
AAA_22
HTH_77
AAA_16
nSTAND1
nSTAND3
AAA
AAA_11
NB-ARC
AAA_14
RuvB_N
TIP49
PhoH
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
CAK05798
UniProt:
Q1MMK4
LinkDB
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Position
complement(339705..342569)
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AA seq
954 aa
AA seq
DB search
MEELEEANVTTYCFGDCRFIPARQLLLHREVPIRVGSRAIDLLHALVRRPGIVVSKDELF
RAAWPNVFVDESNLKVNIAVLRRALAQVEPDLTCIATVPGRGYRFVAPLRVLGVADEAAL
SDAVRGISGELPAPPALIGRDEAMADLAGALAETRLLTIVGPPGVGKTSVAVATARQVGE
SLKDGVCFVDLAAIDSPQLVAPAIAFACGLNSNLVNILAGLVEMLRDRELLLVLDNCEHV
LNAAATVADHLNHALPRLLVVTTSREPLRCRRESVYRLAPLRFPPAGSELDAAAALDFSA
VELLVQRAVTQGYRLDDADASSLAAISRRLDGIALAIELAAPRLSTDGPAKLADLLENAF
DAFVLQGNAAAPRHMTLMAMLDWSYRLLPEREACLLRHLSLFSGTFTLNDVVGVCGHLGS
AEDVGAWLESLAARSLSSVSYHSGHRYYRLLDSTRSFASERLRASGEEQAAMASYTHYLL
ALFEQGEVEWNWRAREDWTARYGRWGNDLHRAIDWAWRDGHNRELGIRLTAAAIPLWNEL
SSLSETRTRVAEVVEGLNGLAMDDVVLRLKLVSAHALNLNFGDDRGPEIEAAWREARTLA
DETGNVEYRLRTTMGWAGAKTFAGNHRQVLSALSELRGLLNQEGGHSAVPDVTRLELVNR
FYCGDIETSVAGLKALARSHSTVAYRSQTSRFQLDRFVGIRSYLAPMLWVVGEHREAFDV
AQECILAATTIGHPVSLMHALAVGGLSVSLWSGLLDVAQDQLKRLEAQYQICQLDIWPPL
IRFYRAAIDTAGRDAQAVDRMRDAIGGLRSRNLRIHFAMNLAMLADAALSHNRLDVARAV
AAEASDYLERDEAWCRSELFRVIGLTRWREGDVLSAAENLAMAVRAAQRSGALTLELRAA
TQQAKLALQTGHGDIALSHLACVYQRFESGLHTADVVAARDQLEVGQMISRGGS
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggaagaattggaagaggccaacgtaacaacctattgtttcggcgactgccgcttcatt
cccgctcgccagttgttgcttcatcgcgaggttccaatccgtgtcggatcccgtgcgatc
gatctacttcatgcgctggtacgccggcctggtatcgttgtcagtaaggacgagctcttt
cgcgcagcctggccgaacgttttcgtcgatgagagcaacctcaaggtcaacatcgcagtg
ctgcggcgcgctctggcgcaggttgagcccgatctaacttgcatcgcaaccgtgccgggc
cgcggctatcggttcgtcgcgccactgcgcgtcctcggcgttgctgacgaggcagctctt
tccgacgcggtcagaggtatttcaggggaattgccagccccaccggcgctgatcgggcgc
gacgaggctatggccgacctcgccggcgcgcttgccgagaccaggctgcttacaattgtc
ggcccacccggcgtcggcaagacgagcgtagctgtcgccaccgcacggcaggtcggtgag
agcttgaaggacggcgtctgcttcgtcgatcttgcggcgatcgactctccgcagctggta
gcgccggcaattgcctttgcgtgtggcctgaacagcaatctcgtcaatatcctggcaggt
cttgtcgaaatgttgcgcgaccgtgaattgttgctggtgctcgacaattgcgaacatgtg
ttgaacgccgcggcgacggttgcagaccacctcaatcacgcgcttccgaggcttctcgtc
gtcacgacgagtcgagagccactccggtgcaggcgggagtcggtctatcgtctcgccccg
cttcgctttccgcccgcggggagcgagctggacgcggcagcggcgttagacttttcggcc
gtagaattgctggtacagcgcgctgtgacgcagggatatcggctcgacgatgcggacgcc
tcttcgctcgcggccattagccgtcgcctcgatggtatcgcgctggcgatagaattggcg
gccccgcggctgtccaccgatgggcctgccaagctggccgacctgttggagaatgccttc
gatgcgtttgtgttgcaggggaacgcggcggcgcctcggcatatgacgctgatggcgatg
ctggactggagctataggttacttcccgagcgcgaagcatgtctgctgcgtcatctatca
ctatttagtggaactttcacgctgaacgatgttgtcggcgtctgcggccatctcgggtcg
gcagaggatgtcggggcgtggctggagagccttgccgccagatcgttgtcgtctgtcagc
tatcatagcggacaccgatactatcgcctccttgacagcacgcggagcttcgccagcgaa
cgccttcgcgcgagcggcgaagagcaggcggcgatggcgagctatacgcactacctgctg
gctctgttcgaacaaggcgaagtcgagtggaactggcgggcgcgcgaagattggaccgca
cgttacggccgttggggaaatgatctccaccgagccatcgattgggcgtggcgtgatgga
cacaacagggaactcggcatccggctgaccgcagccgccattccactgtggaacgagctg
tcctccctctcagagacccgaacgcgcgtggctgaagtggtggaggggctcaatggtctg
gctatggacgatgttgtgctcagattgaaactcgtgtcggcgcacgccctcaatctcaat
ttcggcgacgatcgcggaccggagattgaagcggcgtggcgtgaagcgaggacccttgcc
gacgaaaccgggaatgtcgagtatcggttgcgaacgacgatgggctgggccggcgcgaag
acattcgccggaaatcatcgccaagtcctgtccgccctttccgaactccgcggcctcctc
aaccaggaaggaggtcactcggcggtgcccgatgtcacgagactggaattggtcaaccgt
ttctactgcggcgatatcgagacttcggtcgcgggcctcaaggcgttggcacgcagtcat
tccacggtcgcctatcgctcgcagacgtcaaggtttcaactcgatcgcttcgtcggaata
cggtcctatctcgcgccgatgctgtgggtagtcggcgagcaccgggaggccttcgatgtg
gcgcaggaatgcattttagccgcaacgaccatcggccatcccgtctcgctcatgcatgcg
ttggcggtggggggactttcggtatcgctttggtctggccttcttgacgtggcgcaggac
cagttgaagcggctggaagcgcagtaccaaatctgtcagctggacatttggccgcccctt
attcgattctatcgggctgccatcgacaccgctggccgtgacgcgcaggcggtagacaga
atgcgtgacgctatcggcggactcaggagccgcaatctgcggattcatttcgcaatgaac
ctcgcaatgctcgcggacgctgctctgtcccataatcgtctcgatgtcgcgcgcgccgtc
gcggcagaagccagcgattatctggagcgggacgaggcttggtgtcgctcagaattgttc
cgcgtcattggcctcacgcggtggcgcgagggtgatgtcctttccgccgcggaaaatttg
gccatggcggtgcgggcggcgcagcgaagcggcgctctaactctcgaactgcgcgctgcg
acccaacaggccaaactcgcgctgcaaactggacatggtgatatcgcgctaagtcacttg
gcctgcgtgtaccaacgcttcgaaagcggcttgcataccgccgatgtggtcgcggcgcgc
gaccagctggaggttggtcagatgatctcacggggcggctcttaa
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