Rhizobium johnstonii: RL0395
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Entry
RL0395 CDS
T00402
Symbol
miaB
Name
(GenBank) putative MiaB protein (methylthiolation of isopentenylated A37 derivatives in rRNA)
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rle
Rhizobium johnstonii
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rle03016
]
RL0395 (miaB)
Enzymes [BR:
rle01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
RL0395 (miaB)
Transfer RNA biogenesis [BR:
rle03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
RL0395 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
CAK05886
UniProt:
Q1MMB6
LinkDB
All DBs
Position
complement(428303..429724)
Genome browser
AA seq
473 aa
AA seq
DB search
MTQDSALLQAPEAIPSESLRDGSNSRKVFIKTYGCQMNVYDSMRMSDALARDGYEPTEDM
EVADLVLLNTCHIREKAAEKVYSALGRLREMKKKKAADGREMMIGVAGCVAQAEGEEILR
RAPAVDVVIGPQTYHRLPEALRRAKQGQRVVDTEYAIEDKFEHLPIAESRRIRARGVTAF
LTVQEGCDKFCTFCVVPYTRGSEVSRSVSQIVEEAEKLADSGVREITLLGQNVNAWHGAG
SQGEAWSLGDLLYRLAEIPGLARLRYTTSHPRDMDDRLINAHRDLSALMPYLHLPVQSGS
DRILKAMNRRHTAAEYLALIERIRTVRPDIALSGDFITGFPGETDEDFKDTLRLVEEVRY
AQAFSFKYSTRPGTPGAELKDQVPEEIKAERLERLQMLLLKQQQEFAESCVGKEIDLLLE
KPGRMPEQLIGRSPWLQSVNVDAKASQIGDIIKVRITGTGTNSLFAEHAEAAV
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacacaggacagcgcccttctccaggcccccgaggcaattcccagcgagagcctccgc
gacggcagcaacagccgcaaggtcttcatcaagacctatggctgtcagatgaacgtctac
gattccatgcgcatgagcgatgcgctcgcccgcgacggctatgagccgacggaagatatg
gaagtggcggacctcgttctcctcaacacctgccatatccgcgagaaggcggccgagaag
gtctattcggcgctcgggcggctgcgcgagatgaaaaagaagaaggcggcggacggacgg
gagatgatgatcggcgttgccggctgcgtcgcccaggccgaaggcgaagagatcctgcgc
cgtgcacccgccgtcgacgtcgtcatcggcccgcagacctaccaccgcctgccggaggcg
ttgcgccgggccaaacaaggccagcgcgtcgtcgacaccgaatatgcgatcgaggacaag
ttcgagcatctgccgatcgccgagagccgaaggatccgcgcccgcggcgtcaccgccttc
ctgacggtgcaggaaggctgcgacaaattctgcaccttctgcgtcgtgccctatacacgc
ggctcggaagtgtcgcgttcggtttcccagatcgtcgaggaagccgaaaagctcgccgac
agcggggtgcgcgaaatcaccctgctcgggcagaatgtcaacgcctggcacggcgccggg
agccaaggcgaggcatggagcctcggcgacctgctctaccggctggccgagatccccggc
cttgcgcggctgcgctataccacaagccatccgcgcgacatggacgaccggctgatcaat
gcccatcgcgacctcagcgcactgatgccttatctgcacctgccggtgcaatcgggctcc
gaccgcatcctgaaagcgatgaaccggcgccacacggcggccgaatatctggcgctgatc
gagcgcattcgcacggtgcggcccgacattgcgctgtcgggcgatttcatcaccggcttt
ccgggggagacagatgaggattttaaggatacattgagacttgtggaggaggtccgttat
gcacaggccttctcgttcaaatactcgacacggccgggcacgcccggcgcggaactgaag
gaccaggtgccggaagagatcaaggcagaacggctggaacgcctgcaaatgcttcttctg
aagcagcagcaggaatttgccgaatcttgcgtcggcaaagagatcgacctgttgctcgaa
aagcccggtcgcatgccggaacaactaatcggacgttctccctggcttcaatcagtgaat
gttgatgcaaaagcatcgcaaatcggtgacattattaaagtgcgaatcacagggaccgga
acaaacagcctgtttgccgaacacgcagaggctgcggtctaa
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