Rhizobium johnstonii: RL0505
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Entry
RL0505 CDS
T00402
Symbol
fadD
Name
(GenBank) putative long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00061
Fatty acid biosynthesis
rle00071
Fatty acid degradation
rle01100
Metabolic pathways
rle01212
Fatty acid metabolism
rle02024
Quorum sensing
rle04146
Peroxisome
Module
rle_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RL0505 (fadD)
00071 Fatty acid degradation
RL0505 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RL0505 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
RL0505 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rle01004
]
RL0505 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rle04147
]
RL0505 (fadD)
Enzymes [BR:
rle01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RL0505 (fadD)
Lipid biosynthesis proteins [BR:
rle01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RL0505 (fadD)
Exosome [BR:
rle04147
]
Exosomal proteins
Exosomal proteins of breast milk
RL0505 (fadD)
Exosomal proteins of breast cancer cells
RL0505 (fadD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
CAK05998
UniProt:
Q1MM05
LinkDB
All DBs
Position
complement(543654..545354)
Genome browser
AA seq
566 aa
AA seq
DB search
MNSISVHPNGAKPDKPWLAAYPDIVPAEIPPLEYASLAELLEKSCARYADRTAFSSMGKG
MRYRELESQTRKLAAWLQSTGLQKGDRVAVMMPNVLQNPIATYAILRAGLVVVNVNPLYT
PRELEHQLKDSGAKAIFVLENFARTVEQVLNKTDLRHVVVTSLGEMLGPKGLIVNFVVRK
VKKLVPSWSIPQHKSFGQVLREGAGKELQPVTLTGGDIAFLQYTGGTTGVAKGAVLTHEN
LLANKLQLSLWLRSAFERKKEPEVLNFLCALPLYHIFALTVNSLMGMSHGAHNILIANPR
DIPGLVKEFEKSKVHIFPGLNTLFNALMNNADFAKLDFSSLIMSLGGGMAVQRPVAERWL
KMTGTAVTEGYGLSETSPVATANRFDSPEFTGTIGLPLPSTDLDIRDEEGNSLPSGQVGE
ICIRGPQVMAGYWQKPEETARVMTDDGYFRSGDMGFMDERGYTKIVDRKKDMILVSGFNV
YPNEIEEVAAMHAGILEAAAIGVPDGHSGEAVKLFVVRKDPNLTEAEVKAHCIANLTNYK
LPRFIEFRTELPKSPVGKILRKDLRG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcatttccgtccatccgaacggagccaagcccgacaaaccctggcttgccgcc
tatcccgatatcgttccggcagagattccgccgctggaatatgcctcgcttgccgaactg
ctcgaaaaatcctgcgcccgttacgccgaccggaccgccttttccagcatgggcaagggg
atgcgctatcgcgagctggagagccagacgcgcaaactcgccgcctggctgcaaagcacc
ggccttcaaaagggcgaccgcgtcgccgtgatgatgccgaacgtgctgcagaacccgatc
gcgacctacgccatcctgcgcgccggcctcgtggtcgtgaacgtcaacccgctctatacg
ccgcgcgagctcgaacaccagttgaaggattccggcgccaaggcgatcttcgtgctggag
aattttgcccgcacggtggagcaggtcctcaacaagacggaccttcgccatgtcgtcgtc
acctcgctcggggaaatgctggggccgaaggggctgatcgtcaatttcgtcgtgcgcaag
gtgaagaagctcgttccctcctggtcgatccctcagcacaagagcttcggccaggtgctg
cgcgaaggtgcgggaaaagagctccagccggtgacgctaacaggcggcgatatcgccttc
ctgcaatataccggcggcacgacgggcgtcgccaagggcgcggtgctgacccatgaaaac
ctgctcgccaacaagctgcagctgtcgctctggctgcgatcggccttcgagcgcaagaaa
gagccggaggtgctgaatttcctctgcgccctgccgctgtaccacatcttcgcgctgacg
gtgaattcgctgatgggcatgtcgcatggcgcccacaatatcctgatcgccaatccgcgc
gacattcctggcctcgtcaaggaattcgaaaaatcgaaggtgcacatcttccccggcctc
aacacgctgttcaatgcgctgatgaacaatgccgatttcgccaagctcgatttctcgtcg
ctgatcatgtcgcttggcggcggcatggccgtccagcgcccggtcgccgaacgctggctg
aagatgacgggcacggcggtgacggaaggctacggcctttccgaaacatcgcctgttgcc
accgccaaccgcttcgattcgcccgagttcactggcacgatcggcctgccgcttccctcc
accgacctcgatatccgcgacgaggaaggcaattcgctgccatcaggccaggtcggcgaa
atctgcatccgcgggccgcaggtgatggccggctactggcagaaaccggaagagacggcg
cgggtaatgaccgatgacggctacttccgctcgggcgacatgggcttcatggacgaacgc
ggctataccaagatcgtcgaccgcaagaaggacatgatcctggtttcgggcttcaacgtc
tatccgaacgagatcgaggaagtcgccgccatgcatgccggtatcctcgaggccgcggcc
atcggggtgccggacggacattcgggcgaggcggtgaagctcttcgtcgtcaggaaggat
ccgaacctgacggaagcggaggtgaaagcccattgcatcgccaacctcaccaactacaag
ctcccgcgcttcatcgaattccgcaccgagctgccgaagtcgccggtcggcaagatcctg
cgcaaggacctgcgcggctga
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