Rhizobium johnstonii: RL0892
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Entry
RL0892 CDS
T00402
Name
(GenBank) putative ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rle
Rhizobium johnstonii
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rle03009
]
RL0892
Enzymes [BR:
rle01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
RL0892
Ribosome biogenesis [BR:
rle03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RL0892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CAK06389
RhizoBase:
RL0892
UniProt:
Q1MKW5
LinkDB
All DBs
Position
960604..962709
Genome browser
AA seq
701 aa
AA seq
DB search
MTPKDKPKRPGAKPLSRDIRSKAGPKADGEKPAKPAVARAVAAETEGEAKAERISKVMAR
AGVASRRDIERMIMEGRVTLNGRVLETPVVNVTLADRIEVDGVPIRGIERTRLWLYHKPA
GLVTTNADPEGRSTVFDNLPEELPRVMSIGRLDINTEGLLLLTNDGGLARALELPATGWL
RRYRVRAHGEIDQDALDKLKDGIAVDGVLYGSIEATLDRTQGSNVWITMGLREGKNREIK
NVLGALGLDVNRLIRISYGPFQLGDLPEGHVVEVRGRTLRDQLGPRLIEEAKANFDAPIY
NAAAVAAEEEAEPAAAERRERPRRDEDKRERALSRLDTKRDDRHGGARKEDDRRDGGRRD
DERPKRPQPLGQRRSANVWMAPGARPLGEKAAAKAAKNAQTARKRGEQSPARGAGFDRIE
DRPRTQVNRVREEDGEWIRSSEEPRRKDEGEGFGRKRGFGDRPAREDRGSGDRPARGERP
FGDRPSRGDRPFGDKPRGDRKPRTDGDERPRAARSSAGDARSERPRGDRPFGDRPPRGDR
PFGDKPRGDRKPRTDGDERPRAARSSAGEGRSERPRSDRPFGDRPPRGDRPFGDKPRADR
RPREDGDERPRAARSFAGEGRSERPRGERSFGDKPSGDKPRGKGFAAKPGGTKPGGAKSF
SGKPKGAKPGGDRPGGDRPAGGPSRGGAKGKGMTRGADRRR
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgacacccaaagacaagccaaaacgcccgggcgcaaagcccctttcacgggatatcagg
tcgaaagccggcccgaaggcggacggcgagaagccggcaaagcctgcggtcgcccgcgcg
gtcgccgccgagaccgaaggcgaggccaaggccgaacgcatttccaaggtgatggcgcgc
gccggcgtcgcctcccgccgcgacatcgaacgcatgatcatggaaggccgggtgacgctg
aacggcagggttctcgaaacccccgtcgtcaacgtcacgctcgccgatcgcatcgaagtc
gacggcgtgccgatccgcggcatcgagcgcaccaggctgtggctctatcataagcctgcc
ggcctggtgaccaccaatgccgatccggaaggccgctcgaccgtcttcgacaacctgccg
gaagaactgccgcgcgtcatgtcgatcggccgcctcgatatcaacaccgaaggcctgctg
ctcttgaccaatgacggcggtctcgcccgcgcgctcgagctgccggcgaccggatggctg
cggcgctaccgcgtccgcgcccatggcgagatcgatcaggacgcgctcgacaagctgaag
gacggcattgccgtcgacggcgtgctctacggctcgatcgaggcgacgctcgaccgcacg
caaggctcgaacgtctggatcaccatgggtcttcgcgaaggcaagaaccgcgaaatcaag
aacgtgctcggcgcgctcggcctcgacgtcaatcgcctgatccgcatttcctatggcccg
ttccagctcggcgacctgccggaaggccatgtcgtcgaagtgcgcggccgtacactgcgc
gaccagctcggcccgcgcctcatcgaggaagccaaggcgaatttcgatgcgccgatctac
aacgcggcggcggtcgctgccgaggaagaggcagagcccgcagcagcggaaaggcgcgag
cgtccgcgccgcgacgaggacaagcgcgaacgggcgctgagccgtctcgacaccaagcgc
gacgaccgccacggtggcgcgcgcaaagaggacgaccgccgcgacggcgggcgtcgggac
gatgaaaggccgaagcgtccccagccgctcggccagcgccgcagcgccaatgtctggatg
gcgccgggcgcccggccgctcggcgaaaaggccgcggcgaaagctgccaagaatgcgcag
accgcacgcaagcgcggcgagcagtcgccggcaagaggcgctggtttcgatcgcatcgaa
gatcgcccgcgcacccaggtgaaccgcgtgcgtgaagaggatggcgagtggatccgctcg
agcgaagagccccgtcgcaaggatgagggcgagggcttcggccgcaagcgcggctttggt
gatcgtcccgcccgcgaagaccgcggttctggcgaccgcccggcgcgcggcgaacggccg
ttcggtgatcgtccctcgcgtggggaccggcccttcggcgacaagccgcgcggtgatcgc
aagccgcgtacggatggtgacgagcgtcctcgggccgcgagaagctctgccggcgatgcc
cgttcggagcgtccgcgcggcgaccggccgttcggtgatcgtcccccgcgtggggatagg
cccttcggcgacaagccgcgcggtgatcgcaagccgcgtacggatggtgacgagcgtcct
cgggccgcgagaagctctgccggcgagggccgttcggagcgtccgcgcagcgaccggccg
ttcggtgatcgtcccccgcgtggagaccggcccttcggcgacaagccgcgtgctgatcgc
aggccgcgcgaggacggtgacgaacgcccgcgggcagccagaagttttgccggcgagggc
cgctccgagcgtccgcgcggcgaaagatcgttcggcgacaagccttcgggtgacaagcct
cgtggcaagggctttgcggccaagcctggtgggaccaaacctggtggggccaagagtttt
tccggcaagccgaaaggcgcgaagccgggcggtgacaggccgggcggcgataggcctgcg
ggcgggccgtccagaggtggtgctaaaggaaagggaatgacgcgcggtgcggatcgtcgg
cggtga
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