Rhizobium johnstonii: RL1006
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Entry
RL1006 CDS
T00402
Symbol
ribA
Name
(GenBank) putative riboflavin biosynthesis protein
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00740
Riboflavin metabolism
rle00790
Folate biosynthesis
rle01100
Metabolic pathways
rle01110
Biosynthesis of secondary metabolites
rle01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
RL1006 (ribA)
00790 Folate biosynthesis
RL1006 (ribA)
Enzymes [BR:
rle01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
RL1006 (ribA)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
RL1006 (ribA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
aBig_2
Motif
Other DBs
NCBI-ProteinID:
CAK06503
UniProt:
Q1MKK2
LinkDB
All DBs
Position
complement(1087363..1088466)
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AA seq
367 aa
AA seq
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MSYDQKRVVDAIRAFEAGEMVVVMDDNDRENEGDLIVAAVHCTPEKMAFIVRHTSGIVCA
PMPKEEAKRLNLNAMVAENDSAHTTAFTVSVDFKHGTSTGISADDRTLTVRNLANPNVGA
SDFVRPGHIFPLVSREGGVLMRSGHTEAAVDLCKLAGLPLIGVISELVNDDGTVTRGPQV
VDFAAQHGLKLVSVADLIAYRQRKETLIELGTSFDIETPFGRAKAHTYSLPWDPMQHLAV
VFGDIRDGVDIPVRLHPENVAEDLFGKNSPVDFYMQKISEQGRGVIVYLREGSVGVGHHD
NGRKARNQGREAHAEAQTRDSEWLEIGLGAQILRDLGVSSIKLLTSRERHYVGLEGFGIK
ISTTEIC
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatgaccagaagcgcgtcgtcgacgccatccgggcctttgaggccggcgagatg
gtcgtcgtcatggacgacaatgaccgcgagaacgaaggcgacctgatcgtcgccgccgtg
cattgcacaccggagaagatggccttcatcgtgcgccacacctccggcatcgtctgcgcg
ccgatgccgaaggaagaggccaagcgcctcaacctcaacgccatggtggcggaaaacgat
tcggcccatacgacggccttcaccgtctcggtcgacttcaagcacggcacgtcgaccggc
atctccgccgacgaccggacgctgacggtgcgcaacctcgccaatccgaatgtcggcgct
tccgatttcgtccgtcccggccacatcttcccgctggtttcccgcgaaggcggggtgctg
atgcgctccggccatacggaagccgccgtcgacctctgcaagctcgccggcctgccgctg
atcggcgtcatctccgagttggtcaacgacgacggcacggtgacgcgcggcccacaggtg
gtcgacttcgccgcacagcacgggctgaagctcgtctccgtcgccgatctcatcgcctac
cgccagcgcaaggaaacgctgatcgaactcggcaccagcttcgacatcgagacgccgttc
ggcagggccaaggcccatacctattcgctgccctgggacccgatgcagcatcttgccgtc
gtcttcggcgacatccgcgacggcgtcgacatcccggtgcgcctgcatccggagaatgtc
gccgaggatctgttcggcaagaacagcccggtcgatttctacatgcagaagatttccgag
caaggccgcggcgtcatcgtctatctgcgcgaaggctcggtcggcgtcggccaccacgat
aacggccgcaaggcccgcaaccagggccgagaagcccatgccgaagcccagacgcgcgac
agcgaatggctggaaatcggcctcggcgcccagatccttagggatctcggcgtcagctcg
atcaagctgctcaccagccgcgagcgccactatgtcggcctcgaaggtttcggcatcaag
atcagcacgacggagatctgctga
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