Rhizobium johnstonii: RL1393
Help
Entry
RL1393 CDS
T00402
Symbol
pbpF
Name
(GenBank) putative peptidoglycan biosynthesis/penicillin binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00550
Peptidoglycan biosynthesis
rle01100
Metabolic pathways
rle01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RL1393 (pbpF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RL1393 (pbpF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rle01003
]
RL1393 (pbpF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rle01011
]
RL1393 (pbpF)
Enzymes [BR:
rle01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
RL1393 (pbpF)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RL1393 (pbpF)
Glycosyltransferases [BR:
rle01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
RL1393 (pbpF)
Peptidoglycan biosynthesis and degradation proteins [BR:
rle01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
RL1393 (pbpF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
CAK06890
UniProt:
Q1MJH0
LinkDB
All DBs
Position
complement(1454232..1456217)
Genome browser
AA seq
661 aa
AA seq
DB search
MRGWKRMVCELAGEGLTLGAAGSVLMLLLAQPAFEATKEDWRNRGDFAVTFTDRYGNVIG
HRGVIHQNSVPIDELPDSLIKSVIATEDRRFFDHFGIDFIGLFRAMSENARAGEVVQGGS
TLTQQLAKNLFLSNERSIDRKVTEAFLALWLEANLSKKEILSTYLDRAYMGGGTFGAAAA
AQFYFGKNITDVNLAESAMLAGLFKAPAKYAPHVNLPAARARANEVLTNLVQSGLMTEGQ
VIAARRNPATVVDRNEVESPDFFLDWAFDEVQRLSSRFHQHSLIVRTTIDMGIQQAAEDS
VETSLREYGEAYHAKQGAMVMIENGGAVRAMVGGRDYGESQFNRASRALRQPGSSFKVYT
YAVAMESGMTPQTTIVDAPIYWGNWSPHNYANRYAGRITLETAIAQSINTVPVRLAKEKL
GIQPIRAMAKNLGVETPIRDDVTIPIGTSEVTVLDQATAYATFPAGGYQSRRHGITQILD
YDGDVLYDFDRDEPAPKRVLSEQADAYMNQMLSRVPYVGTARKAALDNGILTAGKTGTTQ
AYRDAWFVGFTGNYTCAVWFGNDDYTSTNEMTGGSLPAMTFKRAMDYAHQGVTLRAIPGV
ENPLPSEKDLAKTAAAKPQDGLPQLIRPRMLSVQSTGILKKLGEKLKDAAPLAPAKVASA
E
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcggctggaagcgcatggtctgcgaacttgccggcgaaggactgacgctcggagcg
gccggctcggtgctgatgctgctgcttgcccagcccgccttcgaggcgaccaaggaggac
tggcgcaaccgcggcgatttcgccgtcaccttcaccgaccgctacggcaacgtcatcggc
catcgtggcgtcatccaccagaattccgtgccgatcgacgagctgccggattcgctgatc
aaatcggtgatcgccaccgaggaccggcgcttcttcgaccatttcggcatcgatttcatc
ggcctcttccgcgccatgagcgagaatgcgcgcgccggcgaagtcgtccaaggcggctcg
acgctgacgcagcagctcgccaagaacctgttcctgtcgaacgaacgctcgatcgaccgc
aaggtcaccgaggcgtttctggcgctttggctcgaggcaaacctttccaagaaggaaatc
ctctccacctatctcgaccgcgcctatatgggcggcggtacttttggcgcagcggcggcg
gcgcagttctatttcggcaagaacatcaccgatgtgaaccttgccgaatccgccatgctt
gccggcctgttcaaggcgccggcgaaatacgcaccgcatgtcaacctgccggcggcgcgt
gcccgcgccaacgaagtgctgaccaatctggtccaaagcgggttgatgaccgagggccag
gtgatcgccgccaggcgcaatccggccaccgtcgtcgaccgcaacgaggtggaatcgccc
gatttcttcctcgattgggctttcgacgaggtccagcggctttcgtcgcgcttccaccag
cattcgctgatcgtacgcacgacgatcgacatgggcatccagcaggcggcggaggattcg
gtcgagacgtcgctgcgcgaatatggcgaggcctatcacgccaagcagggcgcgatggtg
atgatcgaaaacggcggcgccgtgcgcgccatggtcggcggccgggattacggcgagagc
cagttcaaccgcgccagcagagcgctgcgccagccaggctcgtccttcaaggtctacact
tatgcggtggcgatggagagcgggatgacgccgcagacgacgatcgtcgatgcgccgatc
tactggggcaactggagcccgcacaattacgcaaaccgctatgccggccgcatcacgctc
gagaccgcgatcgcccagtcgatcaacaccgtgccggtgcggctcgccaaggaaaaactc
ggtattcaaccgatccgggcgatggcgaagaacctcggcgtcgaaacgcccatccgcgac
gacgtcaccatcccgatcggcacctccgaggtgacggtgctcgaccaggcgacggcctat
gccaccttcccggccggcggctaccagtcgcgccgccacggcatcacccagatcctcgat
tacgacggcgacgtgctctacgatttcgaccgtgacgagccggcgccgaaacgcgtgctc
tccgaacaggccgacgcctatatgaaccagatgctgtcgcgcgttccctatgtcggcacg
gcgcgcaaagcggccctcgacaacggcatcctgaccgccggcaagaccggcacgacccag
gcctatcgcgacgcctggttcgtcggcttcaccggcaattacacctgcgccgtctggttc
ggcaatgacgactacacctcgaccaacgagatgaccggcggttcgctgccggcgatgacc
ttcaagcgcgccatggattacgcccatcagggtgtgacgctgcgcgccatccccggcgtc
gaaaatcccctgccctcggaaaaggacctcgccaagaccgccgccgccaagccgcaggac
ggattgccgcagctcatccggccgcgtatgctctcggttcaatcgactggcatcctcaag
aagcttggcgaaaagctgaaggatgccgccccgctcgcgccggcgaaggtggcgagcgcg
gagtag
DBGET
integrated database retrieval system
