Rhizobium johnstonii: RL1412
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Entry
RL1412 CDS
T00402
Symbol
groLch2
Name
(GenBank) putative 60 kda chaperonin 5 (GroEL protein 5)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rle
Rhizobium johnstonii
Pathway
rle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RL1412 (groLch2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rle03019
]
RL1412 (groLch2)
03110 Chaperones and folding catalysts [BR:
rle03110
]
RL1412 (groLch2)
03029 Mitochondrial biogenesis [BR:
rle03029
]
RL1412 (groLch2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rle04147
]
RL1412 (groLch2)
Enzymes [BR:
rle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RL1412 (groLch2)
Messenger RNA biogenesis [BR:
rle03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RL1412 (groLch2)
Chaperones and folding catalysts [BR:
rle03110
]
Heat shock proteins
HSP60 / Chaperonin
RL1412 (groLch2)
Mitochondrial biogenesis [BR:
rle03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RL1412 (groLch2)
Exosome [BR:
rle04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RL1412 (groLch2)
Exosomal proteins of other body fluids (saliva and urine)
RL1412 (groLch2)
Exosomal proteins of breast cancer cells
RL1412 (groLch2)
Exosomal proteins of colorectal cancer cells
RL1412 (groLch2)
Exosomal proteins of bladder cancer cells
RL1412 (groLch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
HalX
Motif
Other DBs
NCBI-ProteinID:
CAK06908
UniProt:
Q1MJF2
LinkDB
All DBs
Position
1470011..1471645
Genome browser
AA seq
544 aa
AA seq
DB search
MSAKEIRFSTDARDRLLRGVELLNNAVKVTLGPKGRNVVIDKAYGAPRITKDGVSVAKEI
ELEDKFENMGAQMVREVASKTNDLAGDGTTTATVLAASIFREGAKLVAAGMNPMDLRRGI
DLGVIAVVKEIKARAMKVKSSGEIAQVGTIAANGDATIGEMIARAMDKVGNEGVITVEEA
RTAETELDVVEGMQFDRGYLSPYFVTNAEKMRVELEEPYILVHEKKLGSLQALLPILEAV
VQTGKPLLLISEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAVLTAGQM
ISEDLGIKLENVTLDMLGHAKRVLIDKESTTIIDGSGEKAAIQARIQQIKAQIEDTTSDY
DKEKLQERLAKLAGGVAVIRVGGATETEVKEKKDRIDDALNATRAAVEEGIVPGGGVALL
RAKSALTGLTGENADVTAGISIVLRALEAPIRQIVDNAGFEGSIVVGKLAGSNDHNQGFD
AQTETYVDMIEAGIVDPAKVVRTALQDAGSIAALLITAEVMIADIPAKDSAPAAGNGGMG
AMGY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaaggaaatcaggttctccaccgacgcgcgcgaccgcctgctgcgcggcgtc
gaattgctcaacaatgccgtcaaggtgacgcttggcccgaaggggcgcaacgtcgtcatc
gacaaggcctatggcgcaccgcgcatcaccaaggacggcgtcagcgtcgccaaggagatc
gagctcgaagacaagttcgagaacatgggcgcgcaaatggtgcgcgaggtggcttcgaag
accaatgatcttgccggcgacggcacgacgacggcaacggtgctcgccgcctccatcttc
cgcgaaggcgcaaagctcgtcgctgccggcatgaacccgatggatctgaggcgcggcatc
gatctcggcgttatcgccgtcgtcaaggaaatcaaggcgagggcgatgaaggtcaaatcg
tcaggcgagatcgcacaggtcggcaccattgccgccaatggcgacgccaccatcggagag
atgatcgccagggcgatggacaaggtcggcaatgagggcgtcataacggtcgaagaggcg
cgaactgccgaaaccgaactcgatgtcgtcgagggcatgcagttcgatcgcggctatctc
tcgccctatttcgtcaccaatgccgagaagatgcgcgtggaactggaggaaccctatatc
ctcgttcacgagaagaaactcggcagcctgcaggcgctgctgccgatcctggaagccgtc
gtacagaccggcaagccgctgctcctcatctcggaggacgtcgaaggcgaggcgctggcg
acgcttgtcgtcaacaagctgcgcggcggcctgaaggtcgcagccgtcaaggcgccgggc
ttcggcgatcgccgcaaggcgatgctcgaagacattgccgtgctgaccgccggccagatg
atttccgaggatctcggcatcaagctcgagaacgtcacgctcgatatgctcggccacgcc
aaacgcgtgctgatcgacaaggaaagcaccacgatcatcgacggctccggcgagaaagcg
gccatccaggcgcgcatccagcagatcaaggcgcagatcgaagacaccacctccgactac
gacaaggaaaaactgcaggaacgcctggcgaaactcgccggcggcgtcgcggtcatccgc
gtcggcggcgcgaccgagacggaggtcaaggaaaagaaggaccgcatcgacgatgcgctg
aacgccacccgtgcggcggtcgaagagggcatcgtacccggcggcggcgtggcactgttg
cgcgcgaagtcggcgctgaccgggctgacgggggagaacgccgacgtgacggcgggcatc
tcgatcgtgctcagggcgctcgaagccccgatccggcagatcgtcgacaatgccgggttc
gagggctccatcgtcgtggggaaactcgccggcagcaatgatcacaatcagggcttcgac
gcacagacggagacctatgtcgatatgatcgaggccggcatcgtcgatcctgccaaggtc
gtgcgcaccgctctgcaggacgccggttcgatcgcggcgctgctgatcaccgccgaggtg
atgatcgccgacattcccgcgaaagattctgcgcctgcggccggaaatggcggcatgggc
gctatgggatactga
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