Rhizobium johnstonii: RL1440
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Entry
RL1440 CDS
T00402
Symbol
degP1
Name
(GenBank) putative serine protease
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
rle
Rhizobium johnstonii
Pathway
rle01503
Cationic antimicrobial peptide (CAMP) resistance
rle02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RL1440 (degP1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
RL1440 (degP1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rle01002
]
RL1440 (degP1)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rle03110
]
RL1440 (degP1)
Enzymes [BR:
rle01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
RL1440 (degP1)
Peptidases and inhibitors [BR:
rle01002
]
Serine peptidases
Family S1: chymotrypsin family
RL1440 (degP1)
Chaperones and folding catalysts [BR:
rle03110
]
Other chaperones and cochaperones
DegP / HtrA
RL1440 (degP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
Trypsin
PDZ_6
PDZ
PDZ_Tricorn
PDZ_1
Peptidase_S46
DUF3394
DUF7116
Peptidase_S29
Motif
Other DBs
NCBI-ProteinID:
CAK06935
UniProt:
Q1MJC5
LinkDB
All DBs
Position
1496724..1498319
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AA seq
531 aa
AA seq
DB search
MLKNFNGRPSLATVLKASTVAGIAAAVLATGVPLEITRSYAEAVKVQAPAVPSFANVVDA
VSPAVVSVRVENRVNPVSDNNNDGFSFDFNGRGFDDLPDDHPLKRFFKQFGQDPNDQQGH
SRRFGQNGPNGGPNGPGGKGRLRPVAQGSGFFISEDGYIVTNNHVVSDGQAFVAVMNDGT
ELDAKLIGKDPRTDLAVLKVDGKGKKFTYVNWADDNNVRVGDWVVAVGNPFGLGGTVTAG
IVSARGRDIGSGPYDDYLQVDAAVNRGNSGGPTFNLSGEVVGINTAIFSPSGGSVGIAFA
IPASTARDVVADLMKDGQVSRGWLGVQIQPVTKDIAESIGLSEPSGALVVAPQAGSPGDK
AGMKAGDVVTALNGETIKDARDLSRRIGAMQPGSKVELSVWRAGKAQPLTVELGTLPIDQ
KDASADDNSQPQQPEAPASEKALADLGLTVGPSDDGKGLAITGIDPDSDAADKGIKEGEK
ITSVNNQEVASPEDVVKVLNQAKKDGRTRALFQIQSNEGSRFVALPINGQG
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagaatttcaacggacgtccgtccctcgctactgtgctcaaggcttctaccgtc
gccggtatcgcagccgctgtgcttgcaaccggcgttccgctcgaaatcacccggtcttat
gccgaagctgtcaaggttcaggcgcctgccgttccgagcttcgccaacgtcgtcgacgcc
gtttcaccggctgtcgtttccgtccgggtcgagaaccgcgtcaatcccgtctccgacaac
aacaatgacggcttctccttcgatttcaacggccgcggcttcgacgaccttcccgacgat
catccgctgaagcggttcttcaagcagttcggccaggatccgaatgaccagcagggccat
tccaggcgcttcggccagaacggaccgaatggcggcccgaatggtccgggcggcaagggt
cgcctccgccccgtcgcccagggttccggattcttcatctccgaggacggctatatcgtc
accaacaatcacgtcgtttccgatggccaggccttcgtcgcggtcatgaatgacggcacc
gagctcgatgccaagctgatcggcaaggatccgcgcaccgacctcgccgtgctgaaggtt
gatggcaagggcaagaagttcacctacgtcaactgggccgacgacaataatgtccgcgtc
ggcgactgggtcgttgccgtcggcaaccccttcggcctcggcggcacggtcacggccggc
atcgtctcggcccgcggccgcgatatcggctccggtccctatgacgattacctgcaggtg
gatgccgccgtgaatcgcggcaactccggcggtccgaccttcaacctcagcggcgaagtc
gtcggcatcaacaccgcgatcttctcgccgtcgggcggcagcgtcggcatcgccttcgcc
attcccgcctcgaccgccagggacgtcgtcgccgatctgatgaaggacggccaggtctcg
cgtggctggctgggtgtgcagatccagccggtgaccaaggatatcgccgaatccatcggc
ctctccgagccgagcggcgccctcgtcgttgccccgcaggccgggtcaccgggtgacaag
gccggcatgaaggccggcgacgtcgtcaccgcgctgaacggtgagacgatcaaggatgcc
cgtgatctcagccgccgcatcggcgcgatgcagccgggcagcaaggtcgagctttcggtc
tggcgcgccggtaaggcccagcctctcaccgtcgaactcggcacgttgccgatcgaccag
aaggatgcgtccgccgatgacaacagccagccgcagcagcctgaggcaccggcttccgag
aaggcgcttgccgatctcggcctgacggtcggcccgtctgacgacggcaagggcctggcg
atcacaggcatcgatccggactccgacgctgccgacaagggcatcaaggaaggcgaaaag
atcacttcggtcaacaaccaggaggtcgccagccctgaggatgtcgtcaaggtgctgaac
caggccaagaaggacggccgcacccgcgcgctcttccagatccagtccaatgaaggaagc
cgtttcgtcgcgcttccgatcaacggccagggctga
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