Rhizobium johnstonii: RL1451
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Entry
RL1451 CDS
T00402
Name
(GenBank) putative uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rle
Rhizobium johnstonii
Pathway
rle03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RL1451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rle03400
]
RL1451
Enzymes [BR:
rle01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RL1451
DNA repair and recombination proteins [BR:
rle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RL1451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAK06946
UniProt:
Q1MJB4
LinkDB
All DBs
Position
complement(1513792..1514691)
Genome browser
AA seq
299 aa
AA seq
DB search
MISANDLSPAELAALLHFHADAGVEWLLEEEAIDRFAEFEAMKAARRPAAQAQQQRPAAG
ERPAPGQAQVRPNAAVRPAPAERAASGPQPAIPDGEAVQQARFVAETARSLVELKTAIES
FNGCNLKHSARSTIFASGDAESGIMVIGSAPSAEDDREGMPFSGKSGQLFDKMLAAIGLT
RSAILLTQVIPWRPPGNRAPSAAEMDICRPFIERQIALAEPKAILLLGNFSARFFFGEND
TIHGLRGRWKEIAAADCVIPAIASLHPQDLLTAPVNKRLAWNDLLAFQAKLKSLSLLRN
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgatctccgccaacgacctttccccagccgagctcgcagcgcttctgcatttccatgcc
gatgccggcgtggaatggctgctggaggaagaggcgatcgaccgcttcgccgagttcgag
gcgatgaaggccgcccgccgcccggcggcacaggcgcagcagcaacgtcccgccgctgga
gaacgccctgccccaggtcaggcacaggtgcgcccgaatgcagcggtgcgcccagcgcct
gccgaacgcgcagcgtccggtccgcaaccggcaatcccggatggcgaggcggtgcagcag
gcgcgcttcgtcgccgaaaccgcgcgatcgctcgtcgagctcaagaccgcgatcgaatcc
ttcaacggctgcaacctcaagcacagcgcccgctcgaccatctttgccagcggcgatgcc
gaaagcgggatcatggtgatcggctcggcgccgagcgccgaagacgatcgcgagggcatg
cccttctcgggaaaatccggccagctgttcgacaagatgctggcggcgatcgggctgacc
cgctcagccattctgttgacgcaggtcatcccctggcgaccacctggcaatcgtgcgccc
tcggccgcggaaatggacatctgccgacccttcatcgagcggcagatcgcacttgccgaa
ccgaaggcgatcctgcttctcggcaatttttcggcgcgtttcttctttggcgaaaatgac
acgattcacgggttgcgcggccgttggaaggagattgccgctgcggactgtgtcattcct
gccatagccagcctgcatccgcaggatctgttaaccgcacctgtaaacaagcggctggcc
tggaacgacctgctcgcctttcaagcgaagcttaagtccctctctttgcttagaaattag
DBGET
integrated database retrieval system
