Rhizobium johnstonii: RL1505
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Entry
RL1505 CDS
T00402
Name
(GenBank) putative polymerase
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
rle
Rhizobium johnstonii
Pathway
rle03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RL1505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rle03021
]
RL1505
03400 DNA repair and recombination proteins [BR:
rle03400
]
RL1505
Enzymes [BR:
rle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RL1505
Transcription machinery [BR:
rle03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RL1505
DNA repair and recombination proteins [BR:
rle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RL1505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
Coatomer_E
Motif
Other DBs
NCBI-ProteinID:
CAK07000
RhizoBase:
RL1505
UniProt:
Q1MJ60
LinkDB
All DBs
Position
1574503..1574907
Genome browser
AA seq
134 aa
AA seq
DB search
MARVTVEDCIDKVENRFELVLLASHRARLISQGASITIDRDNDKNPVVALREIADETLSP
DDLKEDLIHSLQKHVEVDEPEPDPASMIAAGGVAAADGEEQDDVPETITFDQMSEEELLA
GIEGLVPPEKSDDY
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgtcacagttgaagattgcatcgacaaggtggagaaccgcttcgagctggtt
ctgctcgccagccaccgcgcccggctgatttcccagggtgcctcgatcaccatcgatcgc
gacaacgacaagaatcctgtggtggccctgcgcgaaatcgccgacgagacgctttcgccc
gatgacctcaaggaagatctgatccattcgctgcagaagcatgtcgaagtcgacgagccc
gagcccgatccggcaagcatgatcgctgccggcggtgtcgccgcagccgacggcgaagag
caggacgacgtgccggagacgatcactttcgaccagatgtcggaagaagagctgcttgcc
ggcatcgaaggcctcgtgccgccggaaaagagcgacgattactaa
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