Rhizobium johnstonii: RL1798
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Entry
RL1798 CDS
T00402
Symbol
rpoA
Name
(GenBank) putative DNA-directed RNA polymerase alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rle
Rhizobium johnstonii
Pathway
rle03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RL1798 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rle03021
]
RL1798 (rpoA)
03400 DNA repair and recombination proteins [BR:
rle03400
]
RL1798 (rpoA)
Enzymes [BR:
rle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RL1798 (rpoA)
Transcription machinery [BR:
rle03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RL1798 (rpoA)
DNA repair and recombination proteins [BR:
rle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RL1798 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
CAK07293
UniProt:
Q1MIB7
LinkDB
All DBs
Position
1889840..1890850
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFSSSSRTRATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVG
DIEILNPEHVICTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLNMTIETDGSITGEDAVAFAARILQDQLGVFVNFDEPQKETEE
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaagaactggcaggaattgatcaagccgaacaaggtggagttctcttcgagc
tcgcgcaccagggcgacgcttgttgccgaaccgctggagcgcggcttcggcctcaccctc
ggcaacgcgcttcgccgcgttctgctctcctcgctgcgcggtgctgccgtcacggcggtg
cagatcgatggcgtgctgcatgaattctcctcgattccgggcgtccgcgaagacgtcacg
gatatcgtgctcaacatcaaggaaatcgccatcaagatggatggcgacgatgcaaagcgc
atggtcgtgcgtaagcagggtccgggcgttgtcacggctggcgacattcagacggtcggc
gatatcgaaatcctcaaccccgagcatgtcatctgcacgctcgacgagggtgccgagatc
cgcatggaattcaccgtcaataacggcaagggctacgttccggccgaacgcaatcgtgcg
gaagatgctccgatcggtctcatcccggtcgacagcctctattcgccggtcaagaaggtg
tcctacaaggttgaaaatacccgcgaaggacaggttctcgactacgacaagctgaacatg
accatcgaaaccgatggctcgatcaccggtgaagacgccgtcgcttttgcggcgcgcatc
ctccaggatcagcttggcgtcttcgtcaacttcgacgagccgcagaaggaaaccgaagag
gaagcagtcaccgaactcgctttcaacccggctctcctgaagaaggtggacgaactcgaa
ctgtcggtccgttcggcaaactgcttgaagaacgacaacatcgtctacatcggcgacctc
attcagaagaccgaagcagaaatgctccgcacaccgaattttggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggcctgcacctcggcatggaagtgccggcatgg
ccgcccgagaacatcgaagatctcgccaagcgttacgaagatcaatactga
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integrated database retrieval system
